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GT24262

CSHL Arabidopsis genetrap mutant lines

Original: GT24262

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24262

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18392 [Map]; Strand: w
      • AT4G00050.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT24262 - 5-prime edge 
    CCGGGTGGGG TCATGTAGCG ATGGTCGTAC CATGGCCGGT GGACCACTAG 
    CAAGAGTGGC ACCGGAGTGG AGCGGCGGCG GGAGTCAGCG GCTGACCATG 
    GACACTTACG ACGTAGGTTT CACCTCAACA TCAATGGGCT CGCACGATAA 
    CACAATCGAC GATCATGACT CCGTCTGCCA CAGCCGCCCA CAGGCAAGTC 
    ATCATATATA TTAACTTGTT CTAGTTAATG ATGTCTCTAG CTTTATAAGT 
    AAATGATAAT AATTAAGGAA AAACGATAGA TGGAGGACGA AGAACAGAAG 
    AAAGCCGGAG GAAAATCATC AGTTTCAACC AAGAGAAGCA GAGCTGCTGC 
    TATTCATAAC CAATCCGAAC GTGTAATGAT TCACTCAACC ATTATTTTAT 
    TTTTCAAAAA AAGTTTCATG TTATTCGTCT ACAGTTACAC ATGGATGACC 
    CCCCTGGGTT

AT4G00050.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link
InterPro Scan - TAIR