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GT24278

CSHL Arabidopsis genetrap mutant lines

Original: GT24278

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24278

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 87954 [Map]; Strand: c
      • AT4G00210.1 - [+] show detail - LOB domain-containing protein 31
        Distance: -1059; Region: intergenic
      • AT4G00220.1 - [+] show detail - Lateral organ boundaries (LOB) domain family protein
        Distance: -2082; Region: intergenic
    Flanking Genome Sequence: GT24278 - 3-prime edge 
    TACCGACCGT TACCGACCGT TTTCATCCCT ACATGACACT GATCACTGTT 
    TGCTTCCCCC GCAAGTACAA CCTCAGTCAG TCAGTTACTG TCATGTCTCT 
    CTTTCTCTCT GTTTGACAAG ATCCCTGACC CTTGTTCACT TCCCTAATTT 
    AAAGCCTTCT CCTTAATGGG CCGGGCCTTG TATCTGTTTC GGATCCTTCT 
    TTATAGCGAA ATGATTAATA GTAGTGATTA CACCTAAAAT GTACGTATAT 
    GACAAAAAGA ATAGTTTTTT TCTTCTGTTT CTCTTGTACT ATTAGGCCTA 
    GTGAATGTAT TAAATACAAA CAGTGTACAT TAGCGTACGC AAGCGGTGAG 
    GAAAGGAGCA AAAAAGGGCG TGATACGAGG ACACGTGTCT CATGTTAGTA 
    CAAACAAAGA TTGGACAAGA GCCGGACGGC ACGGTGACCT CTGTCAACAA 
    CTGTTACCGT TTCTTCTAAT CTATTTGTTA ATCTCCTAAG TAATGTAATT 
    AATTAGTTTT CACTGTTCAT AATTAATCAA GTAATAATAA CATAAGAAAT 
    GAAATGGGAG CGTTACTTGT ATACCATATG CACTCGCAAA CGAGCCATTG 
    GTTGCGTCAA AACGGTTACT TTCTTCATAA AAGTCACATT

AT4G00210.1

Model type
Protein coding
Short Description
LOB domain-containing protein 31
Computational Description
LOB domain-containing protein 31 (LBD31); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 19 (TAIR:AT2G45410.1); Has 416 Blast hits to 414 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 416; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00220.1

Model type
Protein coding
Short Description
Lateral organ boundaries (LOB) domain family protein
Curator Summary
Encodes a protein containing a LOB domain that is expressed in embryos, flower primordium and lateral floral organ boundaries. Overexpression is correlated with activation of STM and KNAT1 and down regulation of PIN1 and reduced auxin transport levels. Ectopic expression in plants results in premature termination of the shoot apical meristem and small, lobed leaves.
Computational Description
JAGGED LATERAL ORGANS (JLO); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 18 (TAIR:AT2G45420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR