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GT24296

CSHL Arabidopsis genetrap mutant lines

Original: GT24296

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24296

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 287513 [Map]; Strand: w
      • AT4G00700.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24296 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTACTTTTGA GCGCAGGTTA 
    GCGGATATAA TGTTGGAGCT GTCTGAATCT ACCAATGAGT CTGAGAAAGT 
    CGCATCCCCG AAAGCTTCAT CAGCCTGAGT TCCAGACCAC ACAGCAAGCA 
    TTATCTCATA ATTCTTCTTC TCCCCCCACT AGTTCTCCAG TCTGTACCAC 
    TGGGGAGCTA AAGGACTATC AGGAGGAACG CGAGACTGAA CCTCACGGAG 
    ATCGAATTTA ACGATCCCAA CAAAATCATC AAGGAGAATG TCTTTATCCT 
    TGACCATAAC TTCAAGAAAG TTCGACTGAA GATTATCTTT AGCGAAGGCA 
    AAGACTTGGT TCCACTCGGG ATCTGTATTC TTGTTAAAAT GTGTGGTAAC 
    ACCTTTGAAG TTTCCGATTT TTACTACAAC ATACGGGTCT AGGCTTCCTG 
    TAAGGTCTTT GTTGGGGAGA T

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 287611 [Map]; Strand: w
      • AT4G00700.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24296 - 5-prime edge 
    TTCGCCTCGG CTATGGTACC TAAGGGTGCA AATATTGGGA GGCTCAGGAC 
    GTCATCATCG TGTCTGACAA ATCCCGTGTT CCAGAGGTCT TTGTGCGAGT 
    AAAAGTCGGT AATCAGATGT TAAGGACTAA ATTTCCCCAG AGAAGCAATA 
    ATCCAAAATG GGGTGATGAG TTCACGTTTG TAGTCGCGGA GCCGTTTGAG 
    GATAACTTGG TTCTCTCCGT GGAAGATCAC ACTGCTCCTA ACAGAGATGA 
    GCCAGTAGGA AAAGCTGTGA TTTTGATGAA TGACATAGAG AAACGTATAG 
    ATGATAAACC TTTTCATGAC CGGTGGGTTC ATCTTGAAGA CTCCATCTCA 
    CACGCTAAGG ATGTTGATAA AGCCAAAAAA GTGAAATTCG CTACTAGGCT 
    CCGATATAAG GCGGTTCTCG ATGGAGGCTA CCACGTTTTT GATGAGTCCA 
    TGTATAACAG CAGTGATCTC AAACCTTCGT CAAGAAAGCT CTGGAAATCA 
    GCAATTGGAG TCTTGGAGCT CGGGATACTT AACGCAAATG TGTTTCATTC 
    GATGAAAACT CGGGAAGGGA AAGGTACTTC GGACACGTAC GTTGTTGCCA 
    A

AT4G00700.1

Model type
Protein coding
Short Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Computational Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR