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GT24315

CSHL Arabidopsis genetrap mutant lines

Original: GT24315

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24315

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1975841 [Map]; Strand: c
      • AT3G06440.1 - [+] show detail - Galactosyltransferase family protein
        Distance: -87; Region: promoter
      • AT3G06440.2 - [+] show detail - Galactosyltransferase family protein
        Distance: -87; Region: promoter
    Flanking Genome Sequence: GT24315 - 3-prime edge
    GACCGTTACC GACCGTTTTC ATCCCTAAAA ACGATGTCGT TTTAACTTTT 
    TTGTATTGCT TTGTTTTGTA CTCTTGGACT ACTAACTAGG ACTCTAATAA
    TTTTTTTTGT CCATTTTTTT GTACTTGGAG ATCAAAATCA TTTCAAATTT
    TCCTGAAATA AACAAATTCT CCGAGAGATA ATCTTCTTTT CATTTCTTAA
    ATCTCATAAT GACAGGCAAA TGGAATAACT TGGCTATATA GGATTGGTTG
    GTTAGAACAA ATATGAATAG AGAGAGAGAG ACTACACTAT ACTGTTTACT
    AAACAAACTT TCCTAAATTA AAAAGTCTCT GTTCTCCTCC TCCACCACCC
    GGGGGGGATC GGGGACTGAA CGGAGCTCTT CCAGCGGACG ATCGGGGACA
    AATCTCTCCC CCTCCTCTGA AATCACTTAA GCTCCAAATG TACACTTTCT
    CCGACACCCT TGGATTCTGA AAACTCACCA CTCTTCTCAT CAACTCCACT
    CCTCCTCCCG CCGGAAAACC TACCGTCAAT CCACTTCCTC CACCGCCAAG
    CTTCAAGCTG CTCATTTTTC
  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1975756 [Map]; Strand: c
      • AT3G06440.1 - [+] show detail - Galactosyltransferase family protein
        Distance: -2; Region: promoter
      • AT3G06440.2 - [+] show detail - Galactosyltransferase family protein
        Distance: -2; Region: promoter
    Flanking Genome Sequence: GT24315 - 5-prime edge
    CCTGATCGTT TTCATTGTAA ATAACTGACA TCGTTTCGTT GTTATATAAA 
    ACAACGTCGT TTCCTATAGC AACAAGATGC TCAGACTCTG CTTCAGCTGG
    CCTTCGTCGT CTCTGCCTGG GCTCTGAAAC TGCATTTGGC TGATCTTGGA
    TCTTCATGAA TTATGTACTT GAAAGATCAT CGAAATTCAA TATAAAACGG
    GTAAAGCTTC TCAATTTTAC AATAAACACA ACTTTTCAGC TATTGAAACA
    GTGACTAAGC TGTTTTTCTT TTGAGCTATA TTTCTTTGTT AGTGCTAAGT
    AATAGTAAAC AACAATTTAC TATGATCTTG CTTCTGGGTC TCCTTATATC
    CATTAAAGAC TGATCCTTTC TGCACCAATT CAGTTTAATC TTTCTTCTTT
    TAGCTTAAAT GTCTCTGGTT AGTTATGTCT GAAGTATACA ACACCGGTTC
    CAAAGTTCGT TGACCATTGT TTGAGTTCTT CTTTTATTAG GATTGTGAGA
    ATAAAAATCG GATTATGCTA ACTCTAATTC GTAATCTGCG TTTTACTTTA
    GGTTACTCAA TGAAGCAATT

AT3G06440.1

Model type
Protein coding
Short Description
Galactosyltransferase family protein
Computational Description
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); BEST Arabidopsis thaliana protein match is: galactosyltransferase1 (TAIR:AT1G26810.1); Has 2377 Blast hits to 2343 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 1703; Fungi - 5; Plants - 611; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G06440.2

Model type
Protein coding
Short Description
Galactosyltransferase family protein
Computational Description
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: galactosyltransferase1 (TAIR:AT1G26810.1); Has 2239 Blast hits to 2201 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 1648; Fungi - 5; Plants - 523; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
Link
InterPro Scan - TAIR