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GT24321

CSHL Arabidopsis genetrap mutant lines

Original: GT24321

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24321

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 100677 [Map]; Strand: c
      • AT2G01150.1 - [+] show detail - RING-H2 finger protein 2B
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT24321 - 3-prime edge 
    GACCGTTACC GACCGTTTTC ATCCCTAAGA ACAACAACAA GAACCAAAGA 
    AACAAAAACA ATCTCTAAAA CCATATCAAT GGGACTACAA GGTCAGCTCT 
    CCGACGTGTC ATCAGATTCG ATCCCACTGA TGCTACTGGC TCTCCTCGCA 
    ACTTTCTTCA GACACGTCCA GTCTCTTCTC CTCTTCCCTT CTTCTGCCCC 
    CGTTGTTGTT GTTACTTCAA ACCTCAGCGT CCTCGCCGAC CAGCTCAACC 
    TAAATCGCCT CTTCTCGTAC CGCTACTCCG ACAACGCAGC CTCTGACTGC 
    ATCGTGTGTC TGTCTAAACT CAAGACCGGA GAAGAAGTGA GGAAGCTAGA 
    TTGCAGACAC GTCTTCCATA AGCAGTGTTT GGAAGGCTGG CTTCAACATC 
    TCAACTTCAA TTGCCCGCTC TGTAGATCTC CATTGCTACC TCATCATCAT 
    CAGGGACATG GCAGTGATGC GTCGATCTCA GCCTTCCCTC TTCGCTCTAC 
    CTCTACTGCA TCATCTCATT GATTTATATG TGAAGAAAGA AGAAAGCAAG 
    AGAGAAGAAG ATGGAGGGAG GATGCTTTTT TATTTATCTT CCTTCTCCTC 
    TTTCCTTTTT AGGAGAAGAT TCTTATTTCT TACTACAGAA GATTGATTCT 
    TCTTATATAT CTAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 100592 [Map]; Strand: c
      • AT2G01150.1 - [+] show detail - RING-H2 finger protein 2B
        Distance: -57; Region: promoter
    Flanking Genome Sequence: GT24321 - 5-prime edge 
    CTTGGTTGTT CTTGCTGCAT ATACTACCTT GCATCTCATC TCTTTCTTCT 
    TCTTTATATG GATGGAGAAG AAGAAGAAAT GACACAGGCC ACGTGTTGTG 
    GGACCCATTA TTTTGCTTTT TGTTAAGCCC TTTCACTTTC AGTCCTTTTC 
    GTTTTTTCCC ATCTTCATAC TTTTCGCCCC GCTATTTGCA TTTTATGATG 
    AATATGACCC AAAACATTTC ACTTTTCTTT ATTCTCACCC ACATTTTCGG 
    TTTATTGGAA AGAGATACTA AAGTCAAAAT TGAATGACTC TAAAATGTTG 
    TTGGATGCTG ATTTGATATC TCTATCTAAG CTCCTTTCTA TCTCCAAAGA 
    CCAAACAAAA TTTTACAGAG GCCTTCAATC ATTGAGCTTT AAAACCTAAA 
    GAAAAAAAAC ACTGAATCAT CATAATGATC TTTCATGATC GCATCTATTC 
    ATCTCACTCG ACA

AT2G01150.1

Model type
Protein coding
Short Description
RING-H2 finger protein 2B
Curator Summary
Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils.
Computational Description
RING-H2 finger protein 2B (RHA2B); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger A2A (TAIR:AT1G15100.1); Has 8536 Blast hits to 8514 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 2151; Fungi - 713; Plants - 4534; Viruses - 16; Other Eukaryotes - 1122 (source: NCBI BLink).
Link
InterPro Scan - TAIR