Home
Mutant Lines
GT24328

GT24328

CSHL Arabidopsis genetrap mutant lines

Original: GT24328

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24328

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 2947105 [Map]; Strand: w
- AT3G09600.1 - [+] show detail - Homeodomain-like superfamily protein
  Distance: 0; Region: exon3 (CDS)
- AT3G09600.2 - [+] show detail - Homeodomain-like superfamily protein
  Distance: 0; Region: exon3 (CDS)

TACCGACCGT TACCGACCGT TTTCATCCCT ACACATGAGC TAATGTCCCG 
TTTTTCTGAA CCTTGAGAAA GTATTTTTGA GCATGACTCC TTATCTGCAG 
TACAAAGTCA AATAAGTTGA AAACATTGCC ACAAAGTAAC TGCGACCAAA 
AATGCAGAGT AAGCTATTTT AAAACCTGAA TCACAGTCTT TGAACCAACA 
AAATCTTCAA TCTTCTTCCA GTCCCGATAA AACCTAAGGA ACATAGAGGA 
GTAGTAGTAT CAGCAGAATC AGGTCCTAGT TACATCAATA ACACTTTCAA 
AAAGTCAACA CAAGTATAAA TTTATTACAG TTGAAGTGCT CCAAGAAGCA 
AATCTTTTTA GCTAAGCAAA TTTTTTATAG CTAAGTTACT ACTAAACCTA 
AGCTAAGTAA CATAAACTTT CCTCTGTTTG TTCAGTCTAT AACTAACTAA 
ACTCAAAAAT CAGCAGCAAA CTAAGAAATT TGAAGTCTCT AAAAACAGAA 
AAACAGAGAT AAATTATTAC AGTTGAAGTG CTTCAAGAAA CTTATCGGGC 
TCTTCCTCTG TCC

AT3G09600.1

Model type: Protein coding
Short Description: Homeodomain-like superfamily protein
Computational Description: Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 9 processes; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: LHY/CCA1-like 1 (TAIR:AT5G02840.3); Has 1480 Blast hits to 1470 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 6; Plants - 1120; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G09600.2

Model type: Protein coding
Short Description: Homeodomain-like superfamily protein
Computational Description: Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 9 processes; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: LHY/CCA1-like 1 (TAIR:AT5G02840.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR