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GT24333

CSHL Arabidopsis genetrap mutant lines

Original: GT24333

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24333

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 288469 [Map]; Strand: w
      • AT4G00700.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24333 - 3-prime edge
    CGTTACCGAC CGTTTTCATC CCTACATTTT AGGCAGGAGA GGTTTTGTGT 
    ATTTCATCAG CATACTGGAG ACCGATGTGC AGGTGAATCT CACCGCTAAG
    TGAAGCTCTC CTCTTTTCTT AAGACCAGTA GGTTGTAGAA CAAGTAAAGG
    GTAAGCGTGC GTGTACACAC GGCCCGTCTG AAGAGTCGAG AGTCTAATGC
    GGACTTTCCC AATCGGCTGA TCTCTCTTGT TTCCGCCATC TCCTGCTGCG
    AAATGAGCGT TGTCTAAAAC GCAAATGGTT AAAACCGTTG CAGGATCAAA
    AACCTCCCAT GTGTATTGCT CATTGTACTT TGGATTCATG CTGTTGATCA
    CAGTTCGTGA TCGAACCCAT TTGTGACCGT ATTTGGCAAC AACGTACGTG
    TCCGAAGTAC CTTTCCCTTC CCGAGTTTTC ATCGAATGAA ACAAATTTGC
    GTTAAGTATC CCGAGCTCCA AGACTCCAAT TGCTGATTTC CAGAGCTTTC
    TTGACGAAGG TCTGAGATCA CTGCTGTTAT ACATGGACTC ATCAAAAACG
    TGGTAGCCTC CATCGAGAAC CGCCTTATAT CGGAGCCTAG TAGCGAATTT
    CACTTTC
  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 288554 [Map]; Strand: w
      • AT4G00700.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24333 - 5-prime edge
    CTCCCTGGCT AAATGCATTA CATACTACCC TTATCCACAA ACCAACAGGA 
    AGCTCTTAAG ATGCAGGCTA TCAACATAAT TATTGTTCGT TTAGGCCGGT
    CCGAGCCACC GCTGAGACGG GAAGTGGTTG ACTATTTGAC AGATTGGAAA
    AGTCAGCTGT TCAGCATGAG GAGAAGCAAA GCCAACTTCA ATAGGTTCAC
    GACAGTGTTC TCCGGTGCGC TGTCTGTTTG GAAATGGATG GAACAAGTGT
    GCACATGGAA GACTCCCGTG ACGACGGCTC TGGTGCACGT GCTCTACACT
    ATGCTTGTGA CGTTCCCGGA GATGATTTTG CCGACTGTGT TTCTGTATAT
    GGCTGTGATT GGGATGTGGA ATTACAGGTT TAAGCCTAGA TTTCCTCCTC
    ATATGGACGC CAAACTATCT TATGCAGACA ATGTAAATTC TGATGAGCTT
    GACGAAGAGT TTGATACCTT CCCGACCGTA AGGGCTCCGG TCTCCGGACA
    TTGTGAAAAT GAGGTAACAA AAATCAAGAA TGATCAAAGA AAATCGAAAA
    CGAAGAAAGA CTTGGTCATT GGTTGATAGT TTTCCTCCCT CATATTTTTC
    AGGTACAACC GGCTGAGATC TGTGGCCGGG AAGGTACAGT CGGTGGCTGG
    AGACATACCC GCACAAGGAG AGCGAGTGCA AGCGTTGCTG AGCTGGCGTG
    ATCCACGCGC CACCG

AT4G00700.1

Model type
Protein coding
Short Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Computational Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR