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GT24334

CSHL Arabidopsis genetrap mutant lines

Original: GT24334

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24334

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15939942 [Map]; Strand: c
      • AT4G33030.1 - [+] show detail - sulfoquinovosyldiacylglycerol 1
        Distance: 2135; Region: intergenic
      • AT4G33040.1 - [+] show detail - Thioredoxin superfamily protein
        Distance: 619; Region: intergenic
    Flanking Genome Sequence: GT24334 - 5-prime edge
    CTAATTGAAA TACCAAAAGC TAAATCTTTC TCAAAAATGG AGATGACTAT 
    CCTAAGTCGT CAGACGATTT CGTGATTGTT TCTTGATCCC GTTTAGGTAC
    GAAGTCGGTA GTGTTTATGC ATTAGAAGTT TCAGTGAAAT TTCCATGTCT
    TAATCTTTCC CTTAATTAAA CAAACGTATC TTGTTTGAGA AAAAGGTTAG
    TTGTGGAATT GTATATACAT TTTTGAATTA TTTGGTTATA AATTCATAAG
    GGTTTTGGAA ATGAATGAAT CAAAAGACCC ACTTTCAATA ATTGAGGGGG
    TTTTGACAGC GACGCTGGGC TTAAGTGGCA TCTCCAAAAA CAAACCCTCT
    TTTTTTGTCC TCCCCACAAT TATTGATTTT CTTTTTCAAA GATTCAAAAA
    AGACCAAAAA TTTCTCTTTT TTCTTCTTCA TC

AT4G33030.1

Model type
Protein coding
Short Description
sulfoquinovosyldiacylglycerol 1
Curator Summary
involved in sulfolipid biosynthesis
Computational Description
sulfoquinovosyldiacylglycerol 1 (SQD1); FUNCTIONS IN: UDPsulfoquinovose synthase activity, sulfotransferase activity, zinc ion binding; INVOLVED IN: cellular response to phosphate starvation, sulfolipid biosynthetic process, glycolipid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); Has 10748 Blast hits to 10748 proteins in 2398 species: Archae - 273; Bacteria - 7931; Metazoa - 289; Fungi - 89; Plants - 466; Viruses - 5; Other Eukaryotes - 1695 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G33040.1

Model type
Protein coding
Short Description
Thioredoxin superfamily protein
Computational Description
Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT5G11930.1); Has 1149 Blast hits to 1147 proteins in 175 species: Archae - 0; Bacteria - 20; Metazoa - 257; Fungi - 124; Plants - 712; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).
Link
InterPro Scan - TAIR