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GT24349

CSHL Arabidopsis genetrap mutant lines

Original: GT24349

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24349

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9449839 [Map]; Strand: c
      • AT1G27200.1 - [+] show detail - Domain of unknown function (DUF23)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24349 - 3-prime edge 
    TGCTGAATCA GAAACCAGAC TAAAAGTCAT TCTTGGTGTT GCCTCTGCCA 
    CGGCAGATAA CCAGTCACTT GATCAGGATA ATTTTACATA ACCAAATCCT 
    TCAATCCAGT GTCCCACTTT TCACAGAACC GTCGTTTCCA ATCCGGCGGC 
    TCGATTGCCT CTGTCCCGAG CCCTGAAGCT CGATCTTTAG ACCCTTGATT 
    CTGATTCTCT TGCCAGTCAA CAACATAAGT AGCCACTCTT CTGTAAAACT 
    TAGCTTTGAA AGTGTGCCAA ACTTGGTAAT TGGAATTGGT TC

AT1G27200.1

Model type
Protein coding
Short Description
Domain of unknown function (DUF23)
Computational Description
CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G27330.1); Has 321 Blast hits to 319 proteins in 87 species: Archae - 0; Bacteria - 165; Metazoa - 2; Fungi - 4; Plants - 113; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Link
InterPro Scan - TAIR