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GT24353

CSHL Arabidopsis genetrap mutant lines

Original: GT24353

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24353

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT24353 - 3-prime edge 
    CCTTCCCTAG ATCTTTATAA TAATGTTCAT TACACTTCAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 377429 [Map]; Strand: w
      • AT3G02120.1 - [+] show detail - hydroxyproline-rich glycoprotein family protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G02125.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -776; Region: promoter
    Flanking Genome Sequence: GT24353 - 5-prime edge 
    TGATGCAATG ATGTCTCCAG TTACTAAAGG TCTTCTCGCA AGGACCAGAA 
    AGTCTTCCGG TTCTCTTATT CCACCCAGCT TTAACCAAAC CAAGGTCAAT 
    TTCATTTATA TACCAAAATC AAACCCGGTT TTATATACAT TTTACTAACA 
    TTTTAACAAC TTTTTTCAGA TTCAAGAACT ACGCAAACCG GAATCGGGTT 
    TATCATCTGT CAGTTGCTGA AAAGTGAAGA CATTATGAAT TTGTTGCATG 
    TATCTAATGT ATTTCTCGGC TATAATAAAA GAAATTGATT TACTCTTGTC 
    TTGTTTTGCT GTTTTGTTAA AATTAAACCG TCAAATAAAA AAAATAGTTA 
    ATTGTGATTT ACTTTCCAAC TTACAAATTA TTTGACAACT GTAGTTAGCT 
    GAAATTGTTG ATTTATTTGC TGAATTATCA GGCTAAAAAT AGAGGGAAGC 
    TAGTATTAAC TGAATAAACT CTGGTTAGTC ATCTACTTAT CTTCAACAAC 
    ACATTTCATT ACAATTGAAT TAAGTTCTTG TCTTAATCTC GTTACTAACT 
    TTATTCAATT GCAACTAATC CCTTAGTTTA GTTCATAAAT CGTTCCCGCT 
    TAAATAACTA GCAATCTTAG CTTAGCTAGC TAACAACGAA CAAACAAACA 
    AACAAAAAAC TT

AT3G02120.1

Model type
Protein coding
Short Description
hydroxyproline-rich glycoprotein family protein
Computational Description
hydroxyproline-rich glycoprotein family protein; Has 21 Blast hits to 21 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G02125.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G39200.1); Has 2247 Blast hits to 1434 proteins in 202 species: Archae - 4; Bacteria - 111; Metazoa - 942; Fungi - 239; Plants - 140; Viruses - 37; Other Eukaryotes - 774 (source: NCBI BLink).
Link
InterPro Scan - TAIR