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GT24380

CSHL Arabidopsis genetrap mutant lines

Original: GT24380

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24380

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9449780 [Map]; Strand: c
      • AT1G27190.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: -955; Region: promoter
      • AT1G27200.1 - [+] show detail - Domain of unknown function (DUF23)
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: GT24380 - 3-prime edge 
    TACCGACCGT TACCGACCGT TTTCATCCCT AGTCAAATGT AAATAAAATG 
    TACACCTGGC TGCTGAATCA GAAACCAACT AAAAGTCATT CTTGTTGTTG 
    CCTCTGCCAC GGCAGATAAC CAGTCACTTG ATCAGCAAAA TTCGACATAA 
    CCAAATCCTT CAATCCAGTG TCCCACACTT CACAGAACCG TCGTTTCCAA 
    TCCGGCGGCT CGATTGCCTC TGTCCCGAGC CCTGGAGCTC GATCTTTAGA 
    CCCTTGATTC TGATTCTCTT GCCAGTCAAC AACATAAGTA GCCACTCTTC 
    TGTAAAACTT AGCTTTGAAA GTGTCCCAAA CTTGGTACTT GTAATGGTTC 
    ACTACCGCAA CACTCTCCAC CAAACTCATA TGCCCCACTC CTTCTTTCAA 
    CTGAAAATGA TGTACTTCAT TGAGCAATGA GCTTGTGAGC AACTCAGGGC 
    GGATTATCGA CTTGTGTCTC TCGGGGTTCG CTTGTCTACA AGTGTAACCT 
    ACGGTCACGC CTTGTGATGG AACCGAGGTC AGACCGGATG GACCGTAGCT 
    ATGACAGTCC GTTCTGATCT CTCCAACCAA ATCCCAAGAA GTGTAGTTCG 
    ATACAAGCGA CTTCAAAGCG TTTTTGCTCG GTAAGCCTTG AGAGCGATGC 
    GTAGGGA

AT1G27190.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G69990.1); Has 109141 Blast hits to 65135 proteins in 2350 species: Archae - 52; Bacteria - 7607; Metazoa - 18517; Fungi - 2536; Plants - 71890; Viruses - 144; Other Eukaryotes - 8395 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G27200.1

Model type
Protein coding
Short Description
Domain of unknown function (DUF23)
Computational Description
CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G27330.1); Has 321 Blast hits to 319 proteins in 87 species: Archae - 0; Bacteria - 165; Metazoa - 2; Fungi - 4; Plants - 113; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Link
InterPro Scan - TAIR