1. Home
  2. Mutant Lines
  3. GT24381

GT24381

CSHL Arabidopsis genetrap mutant lines

Original: GT24381

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24381

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 325200 [Map]; Strand: w
      • AT3G01960.1 - [+] show detail - unknown protein; Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; B...
        Distance: -113; Region: promoter
      • AT3G01961.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24381 - 3-prime edge 
    TTACCGACCG TTACCGACCG TTTTCATCCC TACCCTGCAT GTATTCGTCA 
    CAACATAACG AAACCCTCCC ATATATATCT ACGCAACAAC ACACTATGTT 
    TGAATGCATG AAACACCAGC TACAGGTAGA TCTCGATCGG GAAAGAAAAA 
    AAGAGTTGTA ATATCATGGA GATGAACAGA AGGAGATCAA GAGGGTTCAT 
    GATAGCTAAG CTAATGCCCT TTTGCAAAGC TGTGAAATCT CCAACTCCTT 
    CCCAAGACCT TTATAATAAT GTTCATTACA CTTCATCTCA CTCGACAAGA 
    TCGTACCGTT ACCCGACCGG ATCGTATCGG TATATTCTTC TCACTCGACC 
    AGATCTTACC GTTACCCCCC CGGATCGTAT CGGTATATTC TTCCCCCTCG 
    ACAAAATCTA ACCTTTCCCC CCCCGGTTCT TATCTTTTTT TTCTTCCCC

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 325290 [Map]; Strand: w
      • AT3G01960.1 - [+] show detail - unknown protein; Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; B...
        Distance: -203; Region: promoter
      • AT3G01961.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24381 - 5-prime edge 
    GGAGATAGAG AGGTATCAAA GACGCGTGGT CCTTCGTCTT GCAATAATAT 
    CACTCAGAAG CATAACATGT TGATGACGAG ATCTCAACTT TCAGGCTCAA 
    ACAGCCACGA CGACACATCT CATTTTACAA TTTAAAATAT ATGCTATATG 
    TGTAATTATA CAGTACAGGG TTCAATCCTT ACGCATTATA TTTACGCTCC 
    TTAATTATCT ATCTTCCGCG GTAGACAGAT GATACGGACG ATTTATGAGA 
    AATCTCTCGG AGAAAATTTA TAAGATATAT CTTGTAGTTC AATTAATAGA 
    TATATTATTC TCTAAGTTCT ATATGAAATA ATGGATGGCG CAAAGCCGCA 
    AACTCTACAA TTTCTCATTG CAAAACATAT TTTCCCAATT GCTATATAAA 
    AAAAGAACAT AACATTTTTC CATTCAATGG GTTCGGAAAA AAGTGAAAGT 
    GTTGAGATTA AGGAACCGTT ATTTTATCCG TGTTTAATAA ATTTTGTGTA 
    ACTAACTTTT TCGTATAACT TTTGAAAAGA ATCAAAAAAA TGTGGATAAG 
    TTTCGATTTA TGTAAAAATG TGAATTAATT TATTCGTGAG AGATTAATAT 
    AAAGAAATTC ACAAGCGAAT AACATTATCT TCGTGCGGTA TTGTGGCGGC 
    GGTAAATTAA AAC

AT3G01960.1

Model type
Protein coding
Computational Description
unknown protein; Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G01961.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR