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GT24391

CSHL Arabidopsis genetrap mutant lines

Original: GT24391

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24391

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 621355 [Map]; Strand: w
      • AT4G01460.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT24391 - 5-prime edge 
    CTCCCTGCCT AAACTAATCT CTCTTGTTGT TTTCTTTGTT GAAGCTAATT 
    ATGAGTGGAT TGATGAGTTT TGGTGAATTA GAAGACCAAT TTGGTCAGAT 
    TTCAGACACT ACTATGGAAG AGAAGATACC ATTTCTGCAA ATGCTTCAAT 
    GCATAGAACA CCCTTTTACA ACAACAGAAC CAAATCAGTT TGTCCAATCA 
    CTTCTCCAGA TCCAAACCCT AGAATCAAAG AGCTGTCTCA CCCTTGAAAC 
    AAACATCAAA AGAGATCCGG GTCAAACAGA TGACCCGGAA AAGGATCCAA 
    GAACAGAAAA CGGAGCAGTA ACGGTCAAAG AAAAAAGAAA ACGGAAACGT 
    ACAAGAGCTC CAAAGAACAA AGACAAAGTT GAAAACCAAA GGATGACTCA 
    CATTGCCGTC GAACGTAATC GAAGACGACA AATGAACGAA CACTTAAACT 
    CTCTCCGATC TCTCAGGCCT CCTTCGTTTC TTCAACGGGT AACAAAATGT 
    TTTAAGGGTT CATTAAACAA GAACGTATTT TTTTTTTCTT TTCAAGAACG 
    TAATTTACCT TTAACAAAAA AACGTTTTTG TTTCTCTAGG GTGACCAACC 
    TTCAATTGTA GGAGGGGCAA TAAATTTC

AT4G01460.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G61950.1); Has 1536 Blast hits to 1519 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 22; Fungi - 44; Plants - 1468; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR