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GT24392

CSHL Arabidopsis genetrap mutant lines

Original: GT24392

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24392

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 516821 [Map]; Strand: w
      • AT1G02490.1 - [+] show detail - unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BL...
        Distance: 87; Region: intergenic
      • AT1G02500.1 - [+] show detail - S-adenosylmethionine synthetase 1
        Distance: -1430; Region: intergenic
    Flanking Genome Sequence: GT24392 - 3-prime edge 
    TTACCGACCG TTACCGACCG TTTTCATCCC TACCTCAGAG CCATGGAGTT 
    GTAGATTATG TAGTGGTCAG AATCAAGATT GAGGATGAAT GACATGATTG 
    CTCTGGCCCT AACCAAAGCA ATTGATTGCT CCAACATTCT CATAACCAGG 
    CCGCTTCTAT CTCCCACACG CAGACTAGGA TTGGTTGCCT GATGTCAATG 
    TCTGTTAGAT CATCAATTAC TGCTGCCTCT GTTCCAGTTA ACATCATCAT 
    CTCCATTTAT AAACAGCTTG GTTCAGAACC ATCATCTTCA TCTCACTCGA 
    CA

AT1G02490.1

Model type
Protein coding
Computational Description
unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G02500.1

Model type
Protein coding
Short Description
S-adenosylmethionine synthetase 1
Curator Summary
encodes a S-adenosylmethionine synthetase. SAM1 is regulated by protein S-nitrosylation. The covalent binding of nitric oxide (NO) to the Cys114 residue inhibits the enzyme activity.
Computational Description
S-adenosylmethionine synthetase 1 (SAM1); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: response to cadmium ion, response to salt stress, ethylene biosynthetic process, S-adenosylmethionine biosynthetic process; LOCATED IN: cell wall, plasma membrane, membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 2 (TAIR:AT4G01850.2); Has 10905 Blast hits to 10897 proteins in 2898 species: Archae - 12; Bacteria - 5497; Metazoa - 373; Fungi - 167; Plants - 706; Viruses - 1; Other Eukaryotes - 4149 (source: NCBI BLink).
Link
InterPro Scan - TAIR