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GT24423

CSHL Arabidopsis genetrap mutant lines

Original: GT24423

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24423

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22621290 [Map]; Strand: c
      • AT3G61120.1 - [+] show detail - AGAMOUS-like 13
        Distance: -799; Region: promoter
      • AT3G61130.1 - [+] show detail - galacturonosyltransferase 1
        Distance: -679; Region: promoter
    Flanking Genome Sequence: GT24423 - 3-prime edge
    TACCGACCGT TACCGACCGT TTTCATCCCT AATTACTAGT TACGGGAAGT 
    TTTAATTGGT CAAAAGGCGC AGGAAGGTTC ATCATTTGTT GTTGGAAAGT
    TGCATTCCTT TTCAAAAGAA AAAAAAGTAA GGTTTTTATG AAAAAGCCTT
    TCAAGAGAAA ACAAATTTTG GTTATATCTT ATTTATATGG TTTGACAACT
    GAATCAAACA TTTACCAAGG TTGTATTTGA TCATTATTAC TAAAAATAAA
    ATCAGCTAAA AAAAAACCAT TACTAGGTCT AGTTACAGGG TTACACTGTA
    TTGTAAATCA TTTAGTAATA AACCAAACAA ATTACTATCA TCATTTTTAA
    TTTGGGTAGC CATTACATAC ATGCAAAATT GTAAATTAAA TTATAAAATC
    ATGCCAAACT ATACTGCTAA ATAAAAATTG AATTGTCATA TCAAATTAAA
    AATTAATGTA TTTTCATGAA AATTGGAAAA AAAAAACTAT TAAATTAAAA
    AGGGGAAATT CAACGGGACC CCCCTTTTTT TATAGGCTTG GGCTTATAAA
    AAATACAAAA GCCCAGTTAA TTATTAAGGG GTCAAAATCA AAACTTGAAA
    GCAAG

AT3G61120.1

Model type
Protein coding
Short Description
AGAMOUS-like 13
Computational Description
AGAMOUS-like 13 (AGL13); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 6 (TAIR:AT2G45650.1); Has 7229 Blast hits to 7228 proteins in 913 species: Archae - 0; Bacteria - 0; Metazoa - 632; Fungi - 307; Plants - 6214; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G61130.1

Model type
Protein coding
Short Description
galacturonosyltransferase 1
Curator Summary
Encodes a protein with putative galacturonosyltransferase activity.
Computational Description
galacturonosyltransferase 1 (GAUT1); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 3 (TAIR:AT4G38270.2); Has 1521 Blast hits to 1503 proteins in 273 species: Archae - 4; Bacteria - 491; Metazoa - 148; Fungi - 2; Plants - 840; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).
Link
InterPro Scan - TAIR