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GT24431

CSHL Arabidopsis genetrap mutant lines

Original: GT24431

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24431

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19237602 [Map]; Strand: c
      • AT2G46800.2 - [+] show detail - zinc transporter of Arabidopsis thaliana
        Distance: 0; Region: intron1 (5UTR)
      • AT2G46800.1 - [+] show detail - zinc transporter of Arabidopsis thaliana
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: GT24431 - 3-prime edge 
    ACCGACCGTT ACCGACCGTT TTCATCCCTA CTGGTGAGCC CTTCTCTTCC 
    TCTCGCCACT TTTTTAGGGT TCGGGTTTTC TTTAAAATCT GACCTTTTTG 
    CTTGCCTCTG TTTTTATTAT TCGTGTTAGG GTTTGTTGTT TTTTCACTTT 
    CTGACTCTGC CATCTGGAAT TTATCTGATT GGGACACTTT GATTCTGTTT 
    ATACAAACAG TAGTTTTATT TACTGAGGGG TCAAACTTGA ATCTGTATTT 
    TAGGGTTTTG ACTCTTTGTG TTATTATATG GTGTGAAAGC GTTGACACTG 
    TTTGTTTGCT TGACGAGTTC CTCCTTTTTG TAGCAGTAGT GGGAATGTGG 
    TGGGATACAT GTCTTTGTCC TTTGATTTGA TATTTCTGGA TAAATTTGCT 
    TTCTTTTTTG TTGAAACAAA TCACCAAATA AAAAAACTCT TGTGGTTCTA 
    TTGAATTGGG TTTCCACTAT CTTTATTGTA AAGGTAACTT TATTTTGTGT 
    TTGTTGGTAT TGAGTTCTGT ACATCCATCA GGATTTTCGT TGTTGTCTGA 
    GCTTTCTTCT ATTTTTTTTC TTATGCAAAT GGAGTCTTCA AGTCCCCACC

AT2G46800.1

Model type
Protein coding
Short Description
zinc transporter of Arabidopsis thaliana
Curator Summary
Encodes a member of the zinc transporter (ZAT) and cation diffusion facilitator (CDF) families. It is expressed throughout the plant, especially in dividing, differentiating and expanding cells. The protein is localized to the vacuolar membrane. Mediates Zn ion homeostasis.
Computational Description
zinc transporter of Arabidopsis thaliana (ZAT); FUNCTIONS IN: zinc ion transmembrane transporter activity, inorganic anion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cellular zinc ion homeostasis, zinc ion transport, response to metal ion; LOCATED IN: vacuolar membrane, plasma membrane, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: metal tolerance protein A2 (TAIR:AT3G58810.1); Has 17776 Blast hits to 10611 proteins in 2227 species: Archae - 165; Bacteria - 10659; Metazoa - 2900; Fungi - 835; Plants - 528; Viruses - 26; Other Eukaryotes - 2663 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G46800.2

Model type
Protein coding
Short Description
zinc transporter of Arabidopsis thaliana
Curator Summary
Encodes a member of the zinc transporter (ZAT) and cation diffusion facilitator (CDF) families. It is expressed throughout the plant, especially in dividing, differentiating and expanding cells. The protein is localized to the vacuolar membrane. Mediates Zn ion homeostasis.
Computational Description
zinc transporter of Arabidopsis thaliana (ZAT); FUNCTIONS IN: zinc ion transmembrane transporter activity, inorganic anion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cellular zinc ion homeostasis, zinc ion transport, response to metal ion; LOCATED IN: vacuolar membrane, plasma membrane, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: metal tolerance protein A2 (TAIR:AT3G58810.1); Has 17747 Blast hits to 10591 proteins in 2218 species: Archae - 164; Bacteria - 10632; Metazoa - 2900; Fungi - 834; Plants - 528; Viruses - 26; Other Eukaryotes - 2663 (source: NCBI BLink).
Link
InterPro Scan - TAIR