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GT24432

CSHL Arabidopsis genetrap mutant lines

Original: GT24432

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24432

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22225614 [Map]; Strand: c
      • AT3G60160.1 - [+] show detail - multidrug resistance-associated protein 9
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: GT24432 - 3-prime edge
    TACCGACCGT TACCGACCGT TTTCATCCCT AGCTACTGGA ATGAAGATGA 
    CACAAACTTG CCAAGCAACT TGCGACATGA CGAAGATGGT TCCAACAATC
    TGAATGATCG AAAAAGCACA CCAACCTAGT TTGACTGCCA TTTCCAAATC
    CAGGACACTT TGATCTGTGG ATGCCTATTA CAAAACATGA AAAAACCAAA
    GGTATTTTCA GTCTTGATTA TAAAAAACAA AACCATGTTT TTTTGTTGGA
    TTGATTCTGG TACTTCACCC TGTTCAAAAT TCTTCCTGTT GGAGTTGAAT
    CGAAAAATGA CATTGGAGCT CTGAAAATGC TGCAAAGCAT CCTTGAAAAA
    AACGTCTCTG CTGTTGAAAG TCCACCTATG GCGACTAAAA CAGTCCGTGC
    TAAAACACAA AGTGAACTTC CTGCAGCAAG AAGTGCATAA ACAAGTAAAA
    TCCGACCCAT TCCTAACTTT GGTATGGATT CAGCAGTTGG AGGAGCAGTC
    CATGCCATCC AGTAATTGCT AGCAATCTGT AGCATTTGGA AGCAAGACTG
    AGCCAATATT ATGAATGGCA CAAGCAATCC GCCTTTCACC GTTGTTAAAT
    ATGCCAAGTA AACTTCTTTG CCAATTACTC CTTTCTCTGT TTCTTC
  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22225522 [Map]; Strand: c
      • AT3G60160.1 - [+] show detail - multidrug resistance-associated protein 9
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: GT24432 - 5-prime edge
    CAGTAGCCTG CGTGTTTTAC CAGGCAAGAG AGAAAACAAA TCCAATTTCT 
    TGACAATGAT ACAACAAATC TTGCTTACTT TTTTGTTTAC TCGTGTTGTC
    TTTAGAGATA TTACACACCA ACAGCAAGAG AACTGTCACG CATGTCAGGA
    GTAGAAAGAG CTCCAATTCT CCACCATTTC GCTGAATCGC TTGCTGGTGC
    AACAACAATA CGTGCTTTTG ATCAACGAGA TCGCTTCATT AGCTCAAACC
    TTGTTCTAAT AGATAGCCAT TCAAGGCCAT GGTTCCATGT TGCATCAGCA
    ATGGAGTGGC TTTCCTTCAG GTTGAATTTG CTGTCTCATT TCGTCTTTGC
    TTTTTCCTTG GTGTTACTTG TGACTCTCCC TGAAGGTGTC ATCAATCCAA
    GTAAGTCTGA TACATCATAA ACCATAAAAT ACATTGTCTA ATGGGATCAG
    AAATTAAACT TCATTTTCAC TTTTCCTTAC AGGTATTGCT GGTCTTGGGG
    TCACATATGG CTTAAGTCTG AATGTTCTAC AAGCCACAGT GATATGGAAT
    ATATGCAATG CAGAAAACAA GATGATTTCT GTAGAAAGAA TTCTTCAGTA
    CTCCAAAATC CCC

AT3G60160.1

Model type
Protein coding
Short Description
multidrug resistance-associated protein 9
Curator Summary
member of MRP subfamily
Computational Description
multidrug resistance-associated protein 9 (MRP9); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to nematode; LOCATED IN: integral to membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 15 (TAIR:AT3G60970.1); Has 679468 Blast hits to 355652 proteins in 3947 species: Archae - 12543; Bacteria - 548953; Metazoa - 12500; Fungi - 7906; Plants - 6622; Viruses - 19; Other Eukaryotes - 90925 (source: NCBI BLink).
Link
InterPro Scan - TAIR