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Mutant Lines
GT24440

GT24440

CSHL Arabidopsis genetrap mutant lines

Original: GT24440

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24440

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 199142 [Map]; Strand: w
- AT2G01440.1 - [+] show detail - DEAD/DEAH box RNA helicase family protein
  Distance: 0; Region: exon1 (5UTR)

TTACCGACCG TTACCGACCG TTTTCATCCC TACTCTTATT AACCTAAAAC 
CCAATTCGAA TCCTTTGTTT GATCAATCAA TTACCGCTCG ATTGACGTGT 
CTGTAGACTT GAAGCAAGCT ATGTTTTGAT CTCTTCCAAT GGCGGCAGTG 
ACTCTATCAC CCTGTAGCAT GGTACTCGTC CCCTTGTATT TTATCTATCA 
TGGTGCTTCT TCGTAGTCGT AGAACGTTTC CCTGATGTAA TTTTTTGGTT 
TTGAAATGTT GTTATTAGTG TTGTGCTAGT AGAAGATTGC GTAGTGTCAT 
TGTAATCCAA GCTCAAAGAG GAAACTGGAA CAGAATCAGG TACTTGTAGG 
AGTTCTTGTG TTTGTTGTTT GTTGAAATTA GGTTGCTTTT GTTGATCAAT 
CAAGCTGGTT CTGTAGGTTG AGTAATTTCT TCTTCTCCAA AGTCTGGAAC 
ATATCTTATC GTTCAAAGCA TAAATATTCT GACAATCTTC TTGAGCAAGT 
TGAGAAGTAT GCCTCTGCTC GGCTCGAGAA TCAGTCCAAG TTGATTACTA 
AGGTAACTCC AGGTTTCATT GTCTCATCTG AAACATTCTA TATAGATTTT 
GAGATTCATG TTTTCCCTAT GCATCAGGTT GCAGCTTTGA TGGAGTGTGA 
TAATGTTGAT GATTTTATTG

5 prime edge [+] show sequence

Chromosome: 2; Position: 199243 [Map]; Strand: w
- AT2G01440.1 - [+] show detail - DEAD/DEAH box RNA helicase family protein
  Distance: 0; Region: exon1 (5UTR)

GAGAAGGGAA CCTCAAATTC CAAGTTCCTG AGCACGATTC GAGTTAAAGT 
TGGAGTCTTT GACAACTTTG TGAGAGTGAG AGAGAGAGGG ACTACAAGGG 
TTTAATTTGT CTTATTTCTA CAAGAGTTAA AGTTGGAGTC TTGGACAATT 
AAAAATTACT CATTTTGAGT TTTTTCATGT ATGTTTATTT GATCGATTCA 
TAGTCCAAGT TTGAATTTGT TTATGAACTC AAAATCATTT CTTATGAAGA 
TAATAGCAAA AGATTATGCA AAAGATTTTA GTTTTGCTTG CTATTGTTTA 
TTGTAGATAT CAACATCTAA TTTAAGTAAA TGATGATTTA GGTAGATTGT 
GGTAATAAAA ATATATATAT GAATTTCAAG TTCCAAGAAA AACCATTACA 
CACGAGATTC CAATATGAGC AGAGAGTAAA AAAAAGAAGA AAAGAGTTAC 
AACAATGACA CCCCTCAGGA AAGACATCAT GATACAATAG GAAAAACACA 
ACAATCGGTG GTTTGCTGCT AAACAACTTG AAAAATTTTT TTTTTTCTGA 
CTA

AT2G01440.1

Model type: Protein coding
Short Description: DEAD/DEAH box RNA helicase family protein
Computational Description: DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: ATP-dependent DNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA repair, DNA recombination; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA helicase, ATP-dependent, RecG (InterPro:IPR004609), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box helicase, putative (TAIR:AT3G02060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR