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Mutant Lines
GT24448

GT24448

CSHL Arabidopsis genetrap mutant lines

Original: GT24448

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24448

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 10463245 [Map]; Strand: c
- AT1G29880.1 - [+] show detail - glycyl-tRNA synthetase / glycine--tRNA ligase
  Distance: -444; Region: promoter
- AT1G29890.2 - [+] show detail - O-acetyltransferase family protein
  Distance: -158; Region: promoter
- AT1G29890.1 - [+] show detail - O-acetyltransferase family protein
  Distance: -178; Region: promoter

TTTACCGACC GTTACCGACC GTTTTCATCC CTAATCAGAT TACCTCTGTG 
ATTTACTTAA TTAGTAATAA ATAAGTAATT AATAATTTAA CAATTAGAGG 
AGAGGCAATC GCCAAACCAA CCAACCGTAC GATTGAATTT GAAGAAAACG 
ACGTCGCGTC CGCCATTTTC TTCTTCCTTG AAGCAATAGC TTCTTCACTT 
CAGATCTCTT CTTCTTCTTC TTCGTTGCCG CTGCCCCAAT TAACTCTGTC 
TATCTCTCTC TTCATCCCCT AGATTGAAAC TAATTGCAAT TGGAGTGTAT 
ATTGCAGTAT CTAGTTTTTG AATCTCTGGG TATTCCTTTA TGGATCCAGA 
AAATATGGTT GTGTCACAGC CAATTACGCC TGGTCAGGTA CAATTTTTCA 
TGATCTTCGG TGATTCAAGT TTCGATTTAC ATTCTTCTCC AACTTCCCGA 
AGCGGATTTT GAGATTTTGA TTGAATTGGC CTGTAGCTTA AGGTGATTAG 
GACTCTCTAT CTTTCTCCTT TATATGAAGG TGGTTGATTC ATTCTTCAGT 
TCATCGGTTG CTTGCTAGAT TAAAATAAAT GTTGGCTGTG TAAAG

5 prime edge [+] show sequence

Chromosome: 1; Position: 10463160 [Map]; Strand: c
- AT1G29880.1 - [+] show detail - glycyl-tRNA synthetase / glycine--tRNA ligase
  Distance: -359; Region: promoter
- AT1G29890.2 - [+] show detail - O-acetyltransferase family protein
  Distance: -243; Region: promoter
- AT1G29890.1 - [+] show detail - O-acetyltransferase family protein
  Distance: -263; Region: promoter

TCTGATTGTG GTTATACGCA ATTTACAGCT CTCACTGCAC ACAAACTTTT 
CTTTCTAATC GCAATGCCTT TGCTTACAGA AATGCATGCA TTTAGGTTTG 
GTTTTGACAA CATATTTGTG TATCTAAAGA GGAAAAAAAG AACAGAAAAA 
CATTAGTGTG GATTTGCCTA TAGATAAACA AACGTAGTGG ACCTTTCTGG 
TAGGTGAGGG ATAAGTTGGT ACCAAACATC AATGTTCACA TATTTTTTTG 
GTGTTAAAGC ATTTGGAAAA TTTTGCATCC ATGTTGAAAC GTCAAACGTG 
TAGATGTGAT GACATTTAAA TGTCTTTACT CTTTATTGGG TTTAGATTTC 
ATTTCACCCA CCAAACCCAC TCCTTGGGCC CAAAGGTTTC CACATTATCA 
TCTTAAACCC TAAGGGGGCC ACTAGTAAGT GGAAACAAAC ACTTCGTCAA 
AGGCGCATCT TCTCTACATT CGTCTTTCAT CGCAAACAAC AAATCTTCAA 
TCTTCGTCAA TTCCAAACCA CCACAATCCT TCGCAACCCA ATCTCCATCG 
CTCCGATCCA GATTCCGATG GACGCCACCG A

AT1G29880.1

Model type: Protein coding
Short Description: glycyl-tRNA synthetase / glycine--tRNA ligase
Computational Description: glycyl-tRNA synthetase / glycine--tRNA ligase; FUNCTIONS IN: glycine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: response to cadmium ion, glycyl-tRNA aminoacylation; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Glycyl-tRNA synthetase, alpha2 dimer (InterPro:IPR002315), S15/NS1, RNA-binding (InterPro:IPR009068), Glycyl-tRNA synthetase, alpha2 dimer, C-terminal (InterPro:IPR018160), Anticodon-binding (InterPro:IPR004154), WHEP-TRS (InterPro:IPR000738), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: tRNA synthetase class II (G, H, P and S) family protein (TAIR:AT1G29870.1); Has 6392 Blast hits to 4464 proteins in 1181 species: Archae - 269; Bacteria - 3324; Metazoa - 242; Fungi - 171; Plants - 75; Viruses - 0; Other Eukaryotes - 2311 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G29890.1

Model type: Protein coding
Short Description: O-acetyltransferase family protein
Computational Description: O-acetyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT2G34410.2); Has 271 Blast hits to 269 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 41; Plants - 106; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G29890.2

Model type: Protein coding
Short Description: O-acetyltransferase family protein
Computational Description: O-acetyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT2G34410.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR