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Mutant Lines
GT24481

GT24481

CSHL Arabidopsis genetrap mutant lines

Original: GT24481

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24481

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 1956436 [Map]; Strand: w
- AT3G06420.1 - [+] show detail - Ubiquitin-like superfamily protein
  Distance: -39; Region: promoter
- AT3G06430.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: exon2 (3UTR)

GGTTAGTTCG TTTTTGATTG TTCGAGAAGA AACGGTAAAA GATGAGAGAA 
AAGAGATTAT TTATAGAAAG ACGACACGCA CTTATCCACT TTTTGGACTT 
GTCCGATTTC TTGTGCACGT CACAGTTTAT CTATGGGCCT CTATTCATAA 
TTTTGGGCCC ATCAAAATAT ATAACACGCA TAGCTGCAAG AACAATCAAG 
TGTATTACAA ACTCTTTTAT TCTACTCTTT CAAGTGAGAC ATCGATCTCT 
CCTTGCAGAG AGAGAGAGAG AGAGATTCAC ACACAAACCG CACTCCTCCT 
GCCGAAAAAT TCTCCCTCTT TTTTGTAGCA ACAGTGCGAT CCATAATTTT 
TTGCCTCTCT TGTTCCAAAA AAAAAATCAT ATCATACACA CCTTCTTTTT 
CATCTC

AT3G06420.1

Model type: Protein coding
Short Description: Ubiquitin-like superfamily protein
Computational Description: autophagy 8h (ATG8H); CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT3G15580.1); Has 1476 Blast hits to 1474 proteins in 273 species: Archae - 0; Bacteria - 0; Metazoa - 722; Fungi - 178; Plants - 301; Viruses - 3; Other Eukaryotes - 272 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G06430.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: embryo defective 2750 (EMB2750); INVOLVED IN: pollen tube development, embryo development ending in seed dormancy; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G53170.1); Has 31867 Blast hits to 12007 proteins in 283 species: Archae - 3; Bacteria - 31; Metazoa - 288; Fungi - 376; Plants - 30037; Viruses - 0; Other Eukaryotes - 1132 (source: NCBI BLink).
Link: InterPro Scan - TAIR