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Mutant Lines
GT24485

GT24485

CSHL Arabidopsis genetrap mutant lines

Original: GT24485

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24485

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 1954267 [Map]; Strand: c
- AT3G06410.1 - [+] show detail - Zinc finger C-x8-C-x5-C-x3-H type family protein
  Distance: -4478; Region: intergenic
- AT3G06420.1 - [+] show detail - Ubiquitin-like superfamily protein
  Distance: 723; Region: intergenic

GACCGTTACC GACCGTTTTC ATCCCCTGAG TCTAACTAAC ACTGGGGAGC 
GCAATTATTA CGTCCTGGAT CAACTATTTT ATTACATTAT TATATCTTGT 
TTGTAACCGA CATTGATATT TATAAATAAG AATGTGGCAG TTAATTAGGA 
ATAACCATCT TTTTTTTTGT CAAGGAATAA CCGAATCTAT ATACAAATGA 
AATGAAAGAG CACAAAAATT CCAAAAAGAA GCTTTGATCC AAATAGTTTT 
GGACATGGAT GGCATCGTAA CATCCCCCCA AAAAAATACT CGATCAATTA 
TTGGTCTCCT TGGGAAATTT TGTTTTATTT GCTCCGAAAT ATTGAGTTTA 
GTTTGAAATG GGGCCAACGC GTCATTAATC ACTATTGAAC TAAAATAAAG 
GCATTAATTA AGTAGTTATA AACTCGTTGG AAACAAAAAA GTTTTAAATC 
CCCATGTTAG AAGTGATTAT TAAAAAGGAA TAAAATATGT AATCGGAACA 
TAAAATGTGT ATAAACAAAA AAGGCAAAAT AACCTTGTAA AGAAAATTAA 
CCATATGATG GATGGATATA CCCAAACAAT ATTCTAAAAA TTGCGGTTTT 
CTTAAAAACC TT

AT3G06410.1

Model type: Protein coding
Short Description: Zinc finger C-x8-C-x5-C-x3-H type family protein
Computational Description: Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 3128 Blast hits to 1576 proteins in 227 species: Archae - 0; Bacteria - 85; Metazoa - 789; Fungi - 248; Plants - 1012; Viruses - 7; Other Eukaryotes - 987 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G06420.1

Model type: Protein coding
Short Description: Ubiquitin-like superfamily protein
Computational Description: autophagy 8h (ATG8H); CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT3G15580.1); Has 1476 Blast hits to 1474 proteins in 273 species: Archae - 0; Bacteria - 0; Metazoa - 722; Fungi - 178; Plants - 301; Viruses - 3; Other Eukaryotes - 272 (source: NCBI BLink).
Link: InterPro Scan - TAIR