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GT24527

CSHL Arabidopsis genetrap mutant lines

Original: GT24527

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24527

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 2680075 [Map]; Strand: w
      • AT4G05190.1 - [+] show detail - kinesin 5
        Distance: 0; Region: exon18 (3UTR)
      • AT4G05200.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 25
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: GT24527 - 5-prime edge 
    CTGAGATCTT CTTGAAACAT AACAAAGCAA TGTGAATGCA TCTGATCACT 
    TCATTTGTCT GAAAATTCCC TCTCATTGCT TCATCTACTA GCTCCAGTGG 
    TGAATTCTCC ACCCATAGCT TCCACACCTG CAGATATTTA TAATGTTTCA 
    GAAAACAGTA CTTAAAAAGA GTTTTTGATT GGTTATAAAA CAGTACTTAC 
    GTAGGTCACT AAATCTCCAA GACCATCTTC TTCATAGAAG CTACTGTTTT 
    TCTTGCCGGT TATGAGTTCA AGAACCAAGA CTCCGAAGCT ATAGACATCC 
    GATTTCACCG AGTATTTCCC GTGGATCGCA TACTCAGGAG ACATATAACC 
    ACTAAAGAGA GAACTTGTTT AATCATAATG GGAAATTGAA TAACTCATTG 
    AAGTGTCAAG ATCACAAGAG GAAAAAACAA CTTACTATGT ACCAACGATT 
    CTTTTAGTAT TGGCTTGAGT TTGATCAACA CCAAAGATCC TCGCCATACC 
    GAAATCTGAG ATCTTCGGAT GCATGTCTGC ATCTAAGAGT ATGTTACTAG 
    CTTTAAGGTC ACGGTGAATG ATCGTTAGCC GAGAATCTCG ATGTAAATAT 
    AGTATTCCTC GAGCTATCCC TTCAATGATC TTGTACCTTC TTTGCCAATC 
    CAAAACTCTT CTCTTCTCAT TATCTACAAA CAAAAAGAAA ACAATCTGA

AT4G05190.1

Model type
Protein coding
Short Description
kinesin 5
Curator Summary
ATK5 encodes a kinesin protein involved in microtubule spindle morphogenesis. It acts as a minus-end directed motor as well as a plus-end tracking protein (+TIP). Localizes to mitotic spindle midzones and regions rich in growing plus-ends within phragmoplasts.
Computational Description
kinesin 5 (ATK5); FUNCTIONS IN: microtubule motor activity; INVOLVED IN: spindle assembly, microtubule cytoskeleton organization; LOCATED IN: spindle microtubule, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 1 (TAIR:AT4G21270.1); Has 92441 Blast hits to 53030 proteins in 2518 species: Archae - 977; Bacteria - 10764; Metazoa - 46004; Fungi - 8189; Plants - 5583; Viruses - 252; Other Eukaryotes - 20672 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G05200.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 25
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 25 (CRK25); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 10 (TAIR:AT4G23180.1); Has 124291 Blast hits to 122724 proteins in 4390 species: Archae - 112; Bacteria - 13863; Metazoa - 45275; Fungi - 10764; Plants - 35367; Viruses - 449; Other Eukaryotes - 18461 (source: NCBI BLink).
Link
InterPro Scan - TAIR