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GT24534

CSHL Arabidopsis genetrap mutant lines

Original: GT24534

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24534

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9741235 [Map]; Strand: c
      • AT1G27950.1 - [+] show detail - glycosylphosphatidylinositol-anchored lipid protein transfer 1
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT24534 - 5-prime edge
    TCGTACTTAG TTATTATTCT TCTCTTTGTT GTCTCTAGGC ATGTATTATT 
    ATTGCTCATT CTGTAATCGT CAAACCAAAA ATCTATTTCT CTAAGTAGCC
    TCAAATATCA GACTAACTTG CATGCAATAG ACACTAAGAC ACATGAAAGA
    TAGCAAAAGC AGATCGATAA AGATTACAGC ATATATGAAC TAAAAGAAAT
    TAACGAGAAA CGTACTTGGA CAGTTGGTAA TGCTAGCGTT GTGGAGCTGA
    CAAGAAGTTG GGAGTTGAAT GAGTTTGTCT TCTTGAACAC CAAGATCCTT
    CAAGGCTTGT CCTCCTGTCT TCGCTTGTTG TATAACGAAA CACAAACACT
    TTGGATCTCT TTCTTTGATA TCTTCAACAG CGTCACAACA CTTCTTAGAC
    GGAATTGTTG CCTTCCCGGT CGCAAAGTCC AAACACAAAG TCACCTTTTG
    AAAATCCTGG TTGCATTCAT CAGCCAAAGC TCCTCCGGAA GCAGCCGGTG
    CAGCGGCGGC GATGGAGGCA ACGATCGTCA TGGTGACTAG GACGAGGTGG
    AAATGAACAC CCTTCATTAT CAGTTTTTCT TTCTTTTGTT CAATTACTCT
    TTTGCTT

AT1G27950.1

Model type
Protein coding
Short Description
glycosylphosphatidylinositol-anchored lipid protein transfer 1
Curator Summary
Encodes LTPG1, a lipid transfer protein with a predicted GPI (glycosylphosphatidylinositol)-anchor domain. Localized in the plasma membrane. Disruption of the LTPG1 gene causes alterations of cuticular lipid composition, but no significant changes on total wax and cutin monomer loads are seen.
Computational Description
glycosylphosphatidylinositol-anchored lipid protein transfer 1 (LTPG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid transport; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 597 Blast hits to 593 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 597; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR