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GT24546

CSHL Arabidopsis genetrap mutant lines

Original: GT24546

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24546

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2221691 [Map]; Strand: c
      • AT3G07020.1 - [+] show detail - UDP-Glycosyltransferase superfamily protein
        Distance: -6; Region: promoter
      • AT3G07020.2 - [+] show detail - UDP-Glycosyltransferase superfamily protein
        Distance: 0; Region: exon1 (5UTR)
      • AT3G07025.1 - [+] show detail - pre-tRNA
        Distance: -555; Region: promoter
    Flanking Genome Sequence: GT24546 - 3-prime edge
    CGACTTGGTT AACCATAAAT GTTCTTTCTC TCTTCATCTC ACTCGACTAA 
    AGGAGAGGAT TAATTATACG ATTCTTTTCT TGTAATTCTT CGATTATTGA
    AATCTTTTTT TAAAGAAATT AAGAAGAAAA GGTTCTATTG TATGGGCACG
    TTCGGACGAA GTGGGTCGAA GACGCGTCTG GTGGCTACGT GATGGGTTTG
    CTCCGGTTCA GGCGGGGGAC TTGGTAATTA ACTGTCGGAG TGATGGATTA
    TTTGGTCAAT TTATAATCAA AAAATATCAA ACTGTC
  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2221133 [Map]; Strand: c
      • AT3G07020.1 - [+] show detail - UDP-Glycosyltransferase superfamily protein
        Distance: 0; Region: exon2 (CDS)
      • AT3G07020.2 - [+] show detail - UDP-Glycosyltransferase superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT24546 - 5-prime edge
    ATCATCAACA AACCAACCTA GGTTAGATAA ATCAAAGACT GAGAGGCAGC 
    AAAAAGTTAC TCACATTCTT GCTGAGGATG CTGCTAAGAT TTTCGATGAC
    AAAATCTCTG CAGGGAAGAA GGTACTGTAC TTCTATTTTT GGTTTGTTTT
    TTTTCTATCT TGTCCTTCTT CTATTTTTAG TTATCTGTTA TATATGAAAT
    CTCTTTGACT TTGAATCATG TGTGCACTTC CTTTTATGAT TCCTACTTTT
    ATGGTCAACG TTACTCTCCG TGACACTAGT CGTTTTTGGA AATGTTATAT
    ATCTGCAGCT TAAATTGCTG AACCGTATAG CTACTGTGAA ACATGATGGG
    ACTGTTGAGT TTGAAGTTCC AGCAGATGCT ATCCCTCAAC CTATTGTTGT
    TGATCGTGGA GAATCGAAAA ACGGTGTTTG CGCTGATGAG TCTATTGATG
    GGGTTGACCT TCAGTATATC CCTCCTATGC AAATTGTGAT GTTAATTGTT
    GGAACACGTG GAGATGTTCA ACCTTTTGTT GCAATAGCCA AACGGCTTCA
    GGTTGGCTCC TATCTTCATT TGCACAATAT TATGAACCTA AATTGGTTGG
    GAGAGAGTAA TTGACTGTTT TGGTTATGTA GGACTATGGC CATCGAGTTA
    GACTTGCAAC TCATGCAAAT TTTAAAGAGT TTGTTTTGA

AT3G07020.1

Model type
Protein coding
Short Description
UDP-Glycosyltransferase superfamily protein
Computational Description
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, carbohydrate metabolic process, metabolic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G43620.3); Has 2447 Blast hits to 2409 proteins in 631 species: Archae - 0; Bacteria - 1513; Metazoa - 298; Fungi - 386; Plants - 150; Viruses - 3; Other Eukaryotes - 97 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G07020.2

Model type
Protein coding
Short Description
UDP-Glycosyltransferase superfamily protein
Computational Description
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, carbohydrate metabolic process, metabolic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G43620.3); Has 2464 Blast hits to 2426 proteins in 636 species: Archae - 0; Bacteria - 1528; Metazoa - 298; Fungi - 386; Plants - 152; Viruses - 3; Other Eukaryotes - 97 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G07025.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Val (anticodon: TAC)
Link
InterPro Scan - TAIR