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GT24553

CSHL Arabidopsis genetrap mutant lines

Original: GT24553

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24553

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11112643 [Map]; Strand: c
      • AT4G20725.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT24553 - 3-prime edge 
    TTACCGACCG TTACCGACCG TCTTCATCTC ACTCATCTAA CAAATCTGAC 
    AAATCTCCGA CTCACCGATA TGCCTTCGAT AACGCTCTGC ATCTGTCATA 
    ATCCCTTGAT TGACCACTAA CCAGAAGAAA GCTCTCACAC GTTCTGGAAC 
    CTTAACTCTC CATATCCGAT AAAAGAATTT CTCCATATTA GGTCGTGGAC 
    TATCATCCCA ACTCAGCATA TTATAAGCGG ACGATACACT GAATTGGCCA 
    TTCTGACTCT CATTCCAGGA GATTCTGTCT CTCGCCACTG TCTCATGATC 
    CAATACGATT GCCCGTAGCT CTAGACATCG GCTCTCTGAA ACATACGGAC 
    TGATCCTACT GATATCCCAG CCACTATCGT CCTTCCACAA ACTCCGCACT 
    GACTCTGTCT CCAAGTTCGC CGGAACCACG CCCTGCCCAT CTTCCCATAA 
    GGGTTTCCCT GAGACCCAGA TATCTCGCCA AAAACGAATA TGATGTTCAT 
    CACCAGGAAC CCAGCAAGTC CCCCGCGATA TCACATCCAC AAGCCCTCTT 
    ACAATGCTTC TCCAAGTTGA TGACCAAGTC CCCTTCTTAC GCAGCCACTG 
    ACAATCCCGG AGATCGCCAA TTTTATACTT TTTTCTTAAG ACCTCAGCCC 
    AAAGACTCGA CTGGTCCTGC AGCAGACGCC AACCAACCTT AGCAATAAGA 
    GCCTTGTTCA TCAATTTCGC ATTGCGAATG CCCAAACCCC CATCTTTCTT 
    AGGTAAGCAG ACCTTTTTCC AAGACACCAA GTGTTGTTTT CTC

AT4G20725.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.2e-31 P-value blast match to GB:NP_038603 L1 repeat, Tf subfamily, member 23 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR