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GT24567

CSHL Arabidopsis genetrap mutant lines

Original: GT24567

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24567

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1880962 [Map]; Strand: c
      • AT3G06210.1 - [+] show detail - ARM repeat superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT24567 - 3-prime edge 
    TACCGACCGT TACCGACCGT TTTCATCCCT AGCAGCACCA GGCCACGTGG 
    ACTGTATCCG GCGTCGGAAT CAGTAGCTTC CGCGTGCTCC AATCAAGCTC 
    AATTTCACTT CTCAGAAATT TAAAACGAAT CAGGTTTCGA TAATCTCTTC 
    TCTCTTTGCT TAATCGAATT GGAATCGATT CAATTTAGGG TGAACATTTT 
    AGTTTCTCTG CAGCGATGGG ATCTTTAAGC CGATCCTCGA CAATGGATTG 
    AGAGAAGCGA CGACGAGAAT CGGACGACAA GAGATCTTTG ATCGTCGAAC 
    AACTCTGACA TGGAAGAACT CAGAAGTTCC TCTTCTTCCA TATGCGAGAT 
    GGCTTTACAT CTCCAGCTAT GTGAGTCGGA TTCTCTACTG GCTCCAGCTT 
    TTGTCAGCGA GTGCTTGTGT GGCTCTGTCT TCCTACAAGC TCGTAATGCA 
    CAACTACGGA GATGTTCAAG ACGGAGACTT GGACAAAAGG AATAGACAAG 
    CCGCTCTCAG CATCTTCTAC TCGCTTGCTC TTGCCGAAGC GTTGTTGTTT 
    CTTGCGGAGA AAGCTTACTG GGAGTGGGAG GTCAGTGTGT GTCACTTGCT 
    TGAGAATGTG ACTAGAGAGT GTGGGTTTGG GGTTACTGGA ATGGTCTCTA 
    TCAAGAGATT CTTCTATGAT GCTTACTCCA AGTCTGTCAA TGGGAGTATC 
    TTTGATGGTG TGAAGATGGA TATGGTTAGC TTTGCTATGG ATCTCTTGGG 
    CTCGAACTGC TCTGATGAAC AGCTCATCGG AGCGAGGATT C

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12511134 [Map]; Strand: w
      • AT4G24080.1 - [+] show detail - aldolase like
        Distance: -224; Region: promoter
    Flanking Genome Sequence: GT24567 - 5-prime edge 
    CTTTATATCT TTTAAACTCC ACGTAATAAC TCATTTTTGT TTGTTTTAAT 
    CAAAAATTCA AACGTCTAAA ATTTCGTCTT AAATAAGAAA TGATATTAAG 
    AAAAATATCT TTGGATTAAT AACAGATCAC CGAAAATTAG AATATGGTTT 
    TACCAACCCA ATTAAATTCT CAAATTAATT GGAAAGAGAA TAATGTTGAC 
    AACAACAAAA AGGAAATAAA TCGCATGCAA TGAAAGGAAT GAATCTTCTT 
    CTTCTTCTTC TCTATTAACG CTTCTTCTTC TTCTCCTTCT TCATCACCCT 
    CCTCCACTTC TCTCAGTCAC ATTGGCGACC AAAAAATCTC TGAAATCACG 
    TCTCCAAGAT GGAGAAAAGC TTCTCGGCCA CTTTCTTCTC TCTCGA

AT3G06210.1

Model type
Protein coding
Short Description
ARM repeat superfamily protein
Computational Description
ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G18980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G24080.1

Model type
Protein coding
Short Description
aldolase like
Computational Description
aldolase like (ALL1); FUNCTIONS IN: carbon-carbon lyase activity, catalytic activity; INVOLVED IN: cytokinin mediated signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: sporophyte; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), HpcH/HpaI aldolase (InterPro:IPR005000); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT4G10750.1); Has 3952 Blast hits to 3952 proteins in 838 species: Archae - 22; Bacteria - 2525; Metazoa - 2; Fungi - 198; Plants - 35; Viruses - 0; Other Eukaryotes - 1170 (source: NCBI BLink).
Link
InterPro Scan - TAIR