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GT24580

CSHL Arabidopsis genetrap mutant lines

Original: GT24580

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24580

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 21699 [Map]; Strand: c
      • AT4G00060.1 - [+] show detail - Nucleotidyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24580 - 3-prime edge
    CTCCCTAATC CCGAGTTCGT GCCAATCCTC CTTCAGATGG TTGGTTATAT 
    CCGCACTAAA GGGCCTTGGT CTTTCATCTC TCTCGA
  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 21579 [Map]; Strand: c
      • AT4G00060.1 - [+] show detail - Nucleotidyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24580 - 5-prime edge
    CGACGGTGAG GTGAGAGAGG CGCTGGTGGA CGCTGAGAGA AGAGAACCAT 
    CGGAGGATCG CCGACCTAGG ATTGGGGATA GTATTAGCCA TTGAAGAGGA
    AGAAGAGTGG GAGTGGTACA AAGATATGTG AGATGTTAGC GAATCGATAA
    GTTGATTCTG AGCCATGGAT GAAGCAGAGG AGAAGAATTT GGAAGGGAGA
    TGGCGATTTT CCATTGTTTC CTCTCTTTTT TTCTTTCTCC AGAGGAAGAC
    GACGAACGGC TAATAACTTA AACCAACTCA ATACCCAACC GGAAATTGGA
    ACCGGTCTTA CTTGCTAACC AATCAATAGG AGTCTATTTA AAACGGGCCT
    GGGCTTGAGC CCATTGTAAA TTCTCGATGC TCTTCATCTC ACTCGA

AT4G00060.1

Model type
Protein coding
Short Description
Nucleotidyltransferase family protein
Computational Description
maternal effect embryo arrest 44 (MEE44); FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), PAP/25A-associated (InterPro:IPR002058); BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT5G53770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR