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GT24595

CSHL Arabidopsis genetrap mutant lines

Original: GT24595

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24595

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4834273 [Map]; Strand: c
      • AT1G14120.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT24595 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTATCTACCA CTCCGTAGCT 
    CTCCGCTAAT CTCCTTGCTA GACTCCTCGC AAGATCATCA GTAGCTTTTG 
    CATACTTTAG CAAAATCTCC CTGCAAGCCA ACAACCAAAA AAAAAAAAAA 
    GGAAAAATTA AAAATTTTTG GAGGGACCCA AAATGGGATT GGGAACCAAA 
    AAATTTGAAA AAAAAAGGAA AAAAACTCCT CAAAAAAATT TAAAAAAAAA 
    AAAATTAAAC TTTTAATTGG GGGGGGGGCC AGTTTTATCA AAAAAAAATT 
    GGAAGGTTGG GGGAAAGGCC TGGCCAAAAA AACCAAAGGT TTCAAAAAAG 
    GGTTGAAACC CCTTAAAGGG TTGGAACCCT TCCCCAAAAA ACCATCGGGT 
    TTTTCCAATT TCCCCCCCTA TGGAAAATTC GGGGAAATTT TAAAAATTTT 
    TT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15443868 [Map]; Strand: c
      • AT4G31910.1 - [+] show detail - HXXXD-type acyl-transferase family protein
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: GT24595 - 5-prime edge 
    AACATAACTT TATAAGTATT TATCCAGAAA TTCTGGAAGA AAGTAAAGCC 
    TATCACGAAA TGAGTATAAA AGTGATAACG ACAACAAATA CAAAGCAGAG 
    AGATGTCATT AAATTATACA TCATCATAAC CGAATTACAA TAAAATGTCT 
    TTAGCGCACA CGCATGCATA TAGAGGAGCC ATTATCATAC TGTATCCTAC 
    CACAAAAATT CTACTAATTA ATTAATTATC ACCAGCTAAT ATATTAGCAA 
    TCAAGGAAAT GATTTGAAAA GCCATTAACA TCTCGTGAGT CCAAGCCAAT 
    CCTCACAATA ACACCTTTGG CAT

AT1G14120.1

Model type
Protein coding
Short Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G14130.1); Has 6316 Blast hits to 6255 proteins in 769 species: Archae - 0; Bacteria - 698; Metazoa - 67; Fungi - 416; Plants - 4549; Viruses - 0; Other Eukaryotes - 586 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G31910.1

Model type
Protein coding
Short Description
HXXXD-type acyl-transferase family protein
Computational Description
HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G41040.1); Has 2584 Blast hits to 2554 proteins in 136 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 40; Plants - 2539; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR