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GT24633

CSHL Arabidopsis genetrap mutant lines

Original: GT24633

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24633

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 20748278 [Map]; Strand: c
      • AT3G55940.1 - [+] show detail - Phosphoinositide-specific phospholipase C family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT24633 - 5-prime edge 
    CGATACCATC TTCATCTGAG TTAGGCCAAA TATCTAATTC AATAACTCTA 
    ACACCTTTTT TCAATGCCTC AATGATAGGC AATTCACTGC AATCACTACT 
    TAGTTGATTA CCTGTTAAAT ACGAATTATG TCCTGTATAT ATGAAATAAT 
    GTGATAATGG AGCATCCATA TCTTGATGCA CCTGCAAAAA TATATTCAAC 
    GATCAATCTC TCTTTAAATT TATCTTCAGT CTCAATCTAA ATTTCAATCT 
    AAAATCGAAT TACCTCAAGA GAAAAAAGAG GAGAGTTGGT AACAGAGAAA 
    AGGTATTTGA AGAAAGCATC AAGGTGGAGA CCATTACGAT GAAGAAGAGA 
    AGAAGAAGCA TTGACGATAT CTTGAGCTTC TTCTTTCGTG GCTTTGTCTT 
    GTTTCTGAAC ATCGATTAGG AATCTGAGGA GGAGATCGGT AGTCATGAGA 
    CCTTTGTCGG AGTAATTGTC GAAAAGTGTT TTGATCTCAG GAGGAGCTAC 
    GGACACAGTG TGTCGGTACC TCCGACGGAA ACAGAAACAG ACTTTGTATG 
    TTTGCTTCGA CATTTGAACA ATTCCTCAAG TGTAATTTGA TGATTGAAGA 
    AGAAGAAGAA ATGATCTCTG CAATGTTTAG GGATTTGTCT TTTTGATCGG 
    ACTTGAAATT TTTTAGTT

AT3G55940.1

Model type
Protein coding
Short Description
Phosphoinositide-specific phospholipase C family protein
Computational Description
Phosphoinositide-specific phospholipase C family protein; FUNCTIONS IN: phosphoinositide phospholipase C activity, phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: signal transduction, intracellular signaling pathway, lipid metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphoinositol-specific, EF-hand-like (InterPro:IPR015359), Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase C, phosphoinositol-specific (InterPro:IPR001192), Phospholipase C, phosphatidylinositol-specific, Y domain (InterPro:IPR001711), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase C 2 (TAIR:AT3G08510.2); Has 7225 Blast hits to 3392 proteins in 352 species: Archae - 10; Bacteria - 635; Metazoa - 3351; Fungi - 1029; Plants - 675; Viruses - 45; Other Eukaryotes - 1480 (source: NCBI BLink).
Link
InterPro Scan - TAIR