GT2743

CSHL Arabidopsis genetrap mutant lines

Original: GT2743

Phenotypes

Morphological phenotypes

Original description

  • stunted plants
Anatomical entity
/structure development stage		 Phenotypes
sporophyte vegetative stage (PO:0007134)
  • abnormal (PATO:0000460)

Original: GT2743

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 10311113 [Map]; Strand: w
      • AT2G24240.1 - [+] show detail - BTB/POZ domain with WD40/YVTN repeat-like protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT2743 - 3-prime edge 
    GACCGTTTTC ATCCCTAAAC GGACCCCATG TAGCGGTCCG TACATGGTCA 
    AGTAAACCGT AGAAAGAAGC TTCTCTATGA AGGAGACGCT CAGGGATGTT 
    GGCCGGAACG TTAAGGTCTC CCGTACGGAG AAGATCAAGA AGAACTGCGA 
    AGCAATCTGA GTTTCTGTCT ACGAGAAGAA TGGAATCTTC AAGTGGTGAA 
    AGATTCCATT CGTCGTCGAA CAATGCTCCG AAGAAAGAAT CACGACCTGC 
    GTTTGCTAAC GTCGTCGCCG TCGTTTCGAA GAGTCGTCCA CCAACGTTGA 
    ATTTGATCCT GTCTTTTGAG ATACCCATCA ATGGAAAATT AGGTGAAGAC 
    GATGTAACAG AGAATGCAAG AAGTTTCCAG GAAAGCTTCG ATTTTTCAAT 
    GAAATTTGAA AAATTGAGCT CCGGGCACGA GAAAGAAGAT CTTTCTGAGT 
    AATGGGAAAT CAAAATTTAT TAGAAAAATT TGAACTTTTT TTCAGAAATT 
    GAATTGACTC TGTCTTCTCT TTTCTCTCTC TGCTTCTGTT TTTTTTTCAT 
    TCCGTTTACA CACAACAGTT GTTTCTACAT TTATACATA

AT2G24240.1

Model type
Protein coding
Short Description
BTB/POZ domain with WD40/YVTN repeat-like protein
Computational Description
BTB/POZ domain with WD40/YVTN repeat-like protein; FUNCTIONS IN: voltage-gated potassium channel activity; INVOLVED IN: potassium ion transport; LOCATED IN: voltage-gated potassium channel complex, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), BTB/POZ fold (InterPro:IPR011333), Potassium channel, voltage dependent, Kv, tetramerisation (InterPro:IPR003131), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain with WD40/YVTN repeat-like protein (TAIR:AT4G30940.1); Has 926 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 2; Metazoa - 686; Fungi - 7; Plants - 126; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).
Link
InterPro Scan - TAIR