GT3388

CSHL Arabidopsis genetrap mutant lines

Original: GT3388

Phenotypes

Morphological phenotypes

Original description

  • stunted plants
Anatomical entity
/structure development stage		 Phenotypes
sporophyte vegetative stage (PO:0007134)
  • abnormal (PATO:0000460)

Original: GT3388

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26929863 [Map]; Strand: w
      • AT5G67470.1 - [+] show detail - formin homolog 6
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT3388 - 5-prime edge 
    CCTACTTTCT CCCTGGTAAC TCCGATCATT TCTCAAGACA GAGACAACTC 
    AAGGGAAGTT CTTTGATTCG ATGAAAACGT TTCTCAAAGA AGCAGAGGAA 
    GAAATCCGAA AGATCAAAGG AGGAGAAAGA AAAGCTTTGT CAATGGTGAA 
    AGAAGTAACA GAGTACTTCC ACGGAAACGC TGCGAGAGAA GAAGCACATC 
    CTTTAAGAAT CTTCATGGTG GTGAGAGATT TTCTCGGAGT TCTCGATAAC 
    GTTTGTAAAG AAGTGAAGAC GATGCAAGAA ATGTCGACAT CGATGGGTTC 
    AGCTTCAGCT AGATCGTTCA GGATTTCAGC AACAGCTTCG TTACCGGTTC 
    TTCATAGGTA TAAAGCAAGA CAAGACGACA CAAGCTCGGA TAGTGAACAC 
    AGCAGCAACT CTTCTACGTG ATGAAAAAAC AAAAAGCTGT ACAGTTTCTT 
    ACACCAGGAC ACGAAGAATT AAATTGGTGT TTCTCAAACC GGAGGAGATA 
    TCAGACATTG AGTTGGTTTA GTCGGAGAAC ACGGGCCGTT TATAGAGTAA 
    CAAACACTAT TAAAGTCTAT AAATGATCAA ATTTTCGTAA CAAATAAGGA 
    ACCTTTTTTT TCTTAGTTTT TTATTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26929893 [Map]; Strand: w
      • AT5G67470.1 - [+] show detail - formin homolog 6
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT3388 - 5-prime edge 
    TCTCAAGACA GAGACGGCTC AAGGGAAGTT CTTTGATTCG ATGAAAACGT 
    TTCTCAAAGA AGCAGAGGAA GAAATCCGAA AGATCAAAGG AGGAGAAAGA 
    AAAGCTTTGT CAATGGTGAA AGAAGTAACA GAGTACTTCC ACGGAAACGC 
    TGCGAGAGAA GAAGCACATC CTTTAAGAAT CTTCATGGTG GTGAGAGATT 
    TTCTCGGAGT TCTCGATAAC GTTTGTAAAG AAGTGAAGAC GATGCAAGAA 
    ATGTCGACAT CGATGGGTTC AGCTTCAGCT AGATCGTTCA GGATTTCAGC 
    AACAGCTTCG TTACCGGTTC TTCATAGGTA TAAAGCAAGA CAAGACGACA 
    CAAGCTCGGA TAGTGAACAC AGCAGCAACT CTTCTACGTG ATGAAAAAAC 
    AAGAAGCTGT ACAGTTTCTT ACACCAGGAC ACGAAGAATT AAATTGGTGT 
    TTCT

AT5G67470.1

Model type
Protein coding
Short Description
formin homolog 6
Computational Description
formin homolog 6 (FH6); FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homology 1 (TAIR:AT3G25500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR