GT36

CSHL Arabidopsis genetrap mutant lines

Original: GT36

Phenotypes

Morphological phenotypes

Original description

  • dark green plants
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • dark green (PATO:0001249)

Original: GT36

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 364864 [Map]; Strand: c
      • AT1G02065.1 - [+] show detail - squamosa promoter binding protein-like 8
        Distance: -345; Region: promoter
      • AT1G02065.2 - [+] show detail - squamosa promoter binding protein-like 8
        Distance: -703; Region: promoter
    Flanking Genome Sequence: GT36 - 3-prime edge 
    ATGANNNGAC CGTTTTCATC CCTAACCAAT ACTAGCTAGA CCCTTTTCTT 
    TCTTTTTTTT TAAANTCCTG CGGGGGCTAT ATATNTATCA TCCATATATA 
    CAATACNCTG TTAAAAAATA ACATAGTAAN ANTCTGTCTA TACATACTTG 
    TGTNTTTAAT TTGTTTGTCA AACAAAATTT CAATTAAAGG CNCCATCAAC 
    AGTTGCTAAN TANTGANTTA CNTTTTTNCN ATATTCAAAT TAANCCTACN 
    TAGGTNCTAC TAAAATTACA AATTAAAAAN CTTTGAAAAA TACTATTATT 
    AAAAAGGGGC AAATAATTGG TAAATAATAA TTTAAATTGT TTTTATTAAA 
    AAAGGGCACA AACACTCACA CACACACTGC TTTCACAACC CATNTNANTT 
    TNCTTTCTNC NCCATCTACA ATTTTTTAAT TANCTNAATA ACAAAACAAA 
    CAGCTATCTC TCTTTTTTTT TTCNAAAAAA AAAAANCCAA AAAAANTTAN 
    TTTTTNAAAG GGNNCNTTNA AAAAAAANGN GGGNAAAAAA NCCCTTAAAA 
    AAAAANGNAA NCCCCCCCCC CCAANNAAAA TTTNNGGNTT TTTNNAAAAA 
    AAAAAAAAAA ATTTTTNCCC NTTTTTTAAC CCAAAAAAAG NTTTTTTATT 
    NCCCTNGNCN CCCCCCCNAN AAAACCCTNC CCAAACCNNT TNCCCCCCAN 
    AANTTTTTCC CCCCCCCTTC CCTTTTNAAN CCCCCCCCNC CTTTAACNAA 
    NCCCCCCNCC NAAAATTNTT AANAAAA

AT1G02065.1

Model type
Protein coding
Short Description
squamosa promoter binding protein-like 8
Curator Summary
Encodes an SBP-box gene, a member of the SPL gene family. Mutants are affected in micro- and megasporogenesis, trichome formation on sepals, and stamen filament elongation.
Computational Description
squamosa promoter binding protein-like 8 (SPL8); CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 2 (TAIR:AT5G43270.1); Has 903 Blast hits to 889 proteins in 57 species: Archae - 0; Bacteria - 2; Metazoa - 44; Fungi - 4; Plants - 841; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G02065.2

Model type
Protein coding
Short Description
squamosa promoter binding protein-like 8
Curator Summary
Encodes an SBP-box gene, a member of the SPL gene family. Mutants are affected in micro- and megasporogenesis, trichome formation on sepals, and stamen filament elongation.
Computational Description
squamosa promoter binding protein-like 8 (SPL8); CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 2 (TAIR:AT5G43270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR