GT4142

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

stunted plants

Anatomical entity /structure development stage	Phenotypes
sporophyte vegetative stage (PO:0007134)	abnormal (PATO:0000460)

Original: GT4142

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 21335004 [Map]; Strand: c
- AT5G52570.1 - [+] show detail - beta-carotene hydroxylase 2
  Distance: 0; Region: intron6 (CDS)
- AT5G52570.2 - [+] show detail - beta-carotene hydroxylase 2
  Distance: 0; Region: intron4 (CDS)

TTTTTGTTTA ACACGTGAAT TGATTTTTAT TTTTTGTTTG CATATGGTTT 
GGATTGGATT TTGAGAATGG TGCAGGAAGT AAAAGAAGTG GGAGGAAAAG 
AAGAGTTGGA GAAAGAGATA AGCCGGAGAA TCAAATTATA CAACAAGGGT 
TCTTCTACCT CTTAATTGCT ACAAACCCAA TTTTACTTCT TTGATGTTTT 
TGTAATACAT TTTGGGACTA GTCTTTCTTT TAGTATATAT AAAAAATGAC 
GTAAAAGAAA GAGTCAGGCT AATAAAGATT TAGAAAAACA TAAAGAAACA 
ATATATTCGG GTTTTGTTGA AAAACAAAGA AAAGGAAGTG TTTCGTTGGA 
AACAAAACGA AAGAAAGAAT TAAGCTCTCC ATTAGAAGGA CAAATTAATG 
GATCATTTGG CATTCTCTTA AAAGAATAGC TAATTTGCTA ATTGATCATA 
TTGCCAAATA ACACTTTTTA AAAA

AT5G52570.1

Model type: Protein coding
Short Description: beta-carotene hydroxylase 2
Curator Summary: Converts β-carotene to zeaxanthin via cryptoxanthin.
Computational Description: beta-carotene hydroxylase 2 (BETA-OHASE 2); FUNCTIONS IN: carotene beta-ring hydroxylase activity; INVOLVED IN: xanthophyll biosynthetic process, carotene metabolic process; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: beta-hydroxylase 1 (TAIR:AT4G25700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G52570.2

Model type: Protein coding
Short Description: beta-carotene hydroxylase 2
Curator Summary: Converts β-carotene to zeaxanthin via cryptoxanthin.
Computational Description: beta-carotene hydroxylase 2 (BETA-OHASE 2); FUNCTIONS IN: carotene beta-ring hydroxylase activity; INVOLVED IN: xanthophyll biosynthetic process, carotene metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: beta-hydroxylase 1 (TAIR:AT4G25700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR