GT421

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

pale green plants

Anatomical entity /structure development stage	Phenotypes
whole plant (PO:0000003)	desaturated green (PATO:0001272)

Original: GT421

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 316121 [Map]; Strand: c
  - AT4G00750.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: GT421 - 3-prime edge
```
CCGGTCATCC CTANCACACN AAGCTCAGGT TCAGTTCGCA CTTGAGAGAG 
GAGTCCCTGC CATCATAGGA GTGTTAGCCT CTATTAGGCT CCCATTTCCG 
GCCAGAGCCT TCGACATTGT TCATCTCNCT CGACGA
```

5 prime edge [+] show sequence

Chromosome: 2; Position: 19605588 [Map]; Strand: c
- AT2G47880.1 - [+] show detail - Glutaredoxin family protein
  Distance: 0; Region: exon1 (3UTR)

AATTTTCNNT TCTCTNNNCA TNAGCAGAAG AGTCATACGT CAACATACAC 
CAGTTGATTA ACTGAACTGA AACACNAGAN AAGCTNAACA ATANAACATA 
CAAACGATAA ACATTAATTC AGACAAAGTC CTCACTGAAT ATCTCGCTAG 
CTCACACTCT AGCTGTAACT GTGTTTATCC TCACTAGCTA ATAATTAGAT 
NTNANNTATN GAGTTGGTTT AATTTNGCTA GTNAAGGATG GACTGATAGG 
GTTNGATCAA ATGGGACNNG AGAGCCACTA AGGTGAAGGG ACATNACNTC 
NTTGGTGGAG CCAACAAGCT TGGCNCCGAC NAAGANNGAC TGGAACCCGN 
CGGTGGAACA GCCGAGCCGG AGCAAGAGGC TTCTCGANCT CACGGNAATC 
CGGGTCGTAG TCNNACNTCG TGGGATGGTT GGTTNAANNC CCNAGGTCCN 
NGNGACNAAG GANNNTGAAC NGANTAACAA AANACAAANN NGAGCTCCNG 
CNNGGAAGGA TCACCACTAC CNCTTTCTGN GNNCACGTTN CNNAACGANT 
TTGTNCCAGG GANCNCCGGN AAAGTT

AT2G47880.1

Model type: Protein coding
Short Description: Glutaredoxin family protein
Computational Description: Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G62960.1); Has 1229 Blast hits to 1227 proteins in 226 species: Archae - 0; Bacteria - 96; Metazoa - 226; Fungi - 100; Plants - 735; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00750.1

Model type: Protein coding
Short Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G45750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR