GT4943

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

tiny, green seedlings

Anatomical entity /structure development stage	Phenotypes
seedling (PO:0008037)	decreased size (PATO:0000587) green (PATO:0000320)

Original: GT4943

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 5; Position: 16816233 [Map]; Strand: w
- AT5G42050.1 - [+] show detail - DCD (Development and Cell Death) domain protein
  Distance: 0; Region: exon1 (CDS)

ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTATGCTG GAGGAAGAGT 
CTTAAACCTC TTGTCCAAAC CATTGTTCAT CTCTCTCGAC GACATCTGGT 
TATTATTGTT CTGCTGATTC TTTCTGTTCT TCTTCCCACC TTTCTGAATC 
TGATGATCTT CGTCGATTCC TTTGTTCTTG TGGTTGTTCT TTAGATTGAC 
GTTGTACCCA TTCTTCTTCA TCGACGTGTA AACCCCTTTG TTGAAATCTC 
CGTTAACGGC GCTTGACGGT GAGTAACCGT TAACGTTAAC GTGGACTGAG 
TTGAATTTCC ACGTGTCGTT GAACGGTGAG TTGAATTTGT CGATTGGGTT 
TAAATCGACG GTGGATTTTG AACC

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 16816295 [Map]; Strand: w
  - AT5G42050.1 - [+] show detail - DCD (Development and Cell Death) domain protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: GT4943 - 5-prime edge
```
CATCCTACTT TCATCCCTGC TCCAGCAGAA GCTTTGCCAA GAAACGAAAC 
CATTGGTGGT TACATCTTTG TCTGCAACAA CGATACCATG GAAGAGAATC 
TCAAACGCCA GCTTTTCGGT ATTCATCACC ACATCTTTCA TCT
```

AT5G42050.1

Model type: Protein coding
Short Description: DCD (Development and Cell Death) domain protein
Computational Description: DCD (Development and Cell Death) domain protein; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G27090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR