GT4947

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

small plants
small plants, delayed flowering

Anatomical entity /structure development stage	Phenotypes
whole plant (PO:0000003)	decreased height (PATO:0000569) decreased height (PATO:0000569)
whole plant flowering stage (PO:0007016)	late (PATO:0000693)

Original: GT4947

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 5; Position: 708026 [Map]; Strand: w
- AT5G03020.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
  Distance: 0; Region: exon1 (CDS)

ACCGACCGTT TTCATCCCTA CACGAAACAG ATTAGAGGAC TGTTCTGCAA 
GTCCATAAAC CTTACGGCAC TCAAAACCTT CCTTGTCTTC ACGCCAATAT 
AGCTTCCCAT CGGAAACATA TAGTAGGCAC GACACCTTAT TAATCACTAA 
GCATGCCTTG GTCGTAAAGT AATGTTTTTT CTTGAAAACA TTTTGAACAG 
TGAGATCAAG TGATGTGAGC AAGGCTCCCA AGTATTGGTC TTTGGATCAT 
AAACTTCTCC TGAGTTCTCA ATATCTGTGG GCATGGAGCC TCTGAAGCCT 
CCAATCACAT AGATCTTACC GTCGATTACA GACGCGGCGG GATAAACTCG 
AGGTTGACGC ATTTTGGGGA GTCTACGCCA TTGATAAGTT CGACAATCAA 
AAATCGACAC TCTGTTGCTT CTTCTTCT

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 708154 [Map]; Strand: w
  - AT5G03020.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: GT4947 - 5-prime edge
```
GAAGAGTGAC AGTTTGGTGG AAGTCGATGA CAAAAGGTTG CGAGTTTGAC 
TGTCTGCTGA CTGAGGAGTG TGAAACCAAG ATTTGGTGTG CAGAGATTTC 
GCTTGAGAGA AGAGGTTTAA GAGAGCTTCG GGGATTTGTT GAATGGTCTA 
AAGAGGTTTT TACCATTAAT AGATGTGACT ATGTTTACGA TTTCATCTCT 
CT
```

AT5G03020.1

Model type: Protein coding
Short Description: Galactose oxidase/kelch repeat superfamily protein
Computational Description: Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G03000.1); Has 6713 Blast hits to 4194 proteins in 283 species: Archae - 8; Bacteria - 340; Metazoa - 4606; Fungi - 65; Plants - 1341; Viruses - 147; Other Eukaryotes - 206 (source: NCBI BLink).
Link: InterPro Scan - TAIR