GT4992

CSHL Arabidopsis genetrap mutant lines

Original: GT4992

Phenotypes

Morphological phenotypes

Original description

  • tiny seedlings
  • small plants
Anatomical entity
/structure development stage
Phenotypes
seedling (PO:0008037)
  • decreased size (PATO:0000587)
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT4992

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 20054920 [Map]; Strand: w
      • AT5G49460.1 - [+] show detail - ATP citrate lyase subunit B 2
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: GT4992 - 3-prime edge
    CCCTATCTCA ATGTCGAATT CGAAATTAGG CAACATTACA CTAATTCGAT 
    AATCACTAAC AAACAGATCT CATTACTCCA TTAACGAATC TGGGATTGAG
    AAAGAAAAAA AGTTCCGATT TTTACGCAAC CCTCCTCGTA AATATCGAAA
    CTTTGGTATC AAAAACACGA ATCGGAATCA AGACAGATCT AAGAAAAAAA
    GTTACGAATT GTTAGAAGAG AACAGACCTG GTCACGACCC GAGTCGAGTC
    TGTGATTAAG GAGAGAATAA ATGGTGGTAG AGAGAAAGAG AGAGGAATGG
    TTTATAGAGG AAGCACCATT AATATAGAGA AATGGGAGGG AAACAAAAGC
    TTCTCACAGT CATGTGGCTT ATTGGTAGGT AGTTAGTTCA CAACTTCTTT
    CTACCCAAAA TTGATTTCTC TATCTTACAT TGACAAAGAG AAACACCTAA
    CAGTTTTTTT TTATTACAAA TTTGTTTTTG TAACATCTTT TGTTTTATTT
    TATTGCAATT TTGG

AT5G49460.1

Model type
Protein coding
Short Description
ATP citrate lyase subunit B 2
Curator Summary
One of the two genes encoding subunit B of the cytosolic enzyme ATP Citrate Lyase (ACL)
Computational Description
ATP citrate lyase subunit B 2 (ACLB-2); FUNCTIONS IN: ATP citrate synthase activity; INVOLVED IN: acetyl-CoA biosynthetic process; LOCATED IN: cytosol, citrate lyase complex, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), Citrate synthase-like, small alpha subdomain (InterPro:IPR016143), Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), Citrate synthase-like, core (InterPro:IPR016141), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), Citrate synthase-like (InterPro:IPR002020), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase B-1 (TAIR:AT3G06650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR