GT5575

CSHL Arabidopsis genetrap mutant lines

Original: GT5575

Phenotypes

Morphological phenotypes

Original description

  • early arrest (before cotyledon emergence) seedlings
  • semi-sterile
  • tiny or dead plants
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)
seedling (PO:0008037)
  • lethal (sensu genetics) (PATO:0000718)
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT5575

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22693944 [Map]; Strand: c
      • AT3G61320.1 - [+] show detail - Bestrophin-like protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT5575 - 3-prime edge
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTATGTGTC AACCACCATT 
    TCTCTTCTTC ATCTCCGTCG ATGACAAACC CTAAACCTAA AACCCCTTAT
    TTTCCCGCCA ATGTATCAAT CCATGAATCT ATCAGTTTCT TCCAATTTCA
    CTCACCGATC ACTCCTCGAA TCTAGATTTC CTATATTCTC CAGCGGATTC
    CGCAAATCCG TCAATCTCAA ACCTCCCCGT GTCTCATCTG GTCCTGAATC
    CAAAGATTCG GGTCAAGAAA GCTTAACCGA TAAGCTTATC CATCTCCTCA
    GAGCTGTTCC AGATGGGGCA GACGAGATAA AAGAGCGTGG GATGCAGCAG
    AAACGCTCTC TCTACACACG CGAGAAATGG GTTGAACATA GAAGCTCTCT
    TCGGCATGTG TGTCATCTAC TC

AT3G61320.1

Model type
Protein coding
Short Description
Bestrophin-like protein
Computational Description
Bestrophin-like protein; CONTAINS InterPro DOMAIN/s: Bestrophin-like (InterPro:IPR021134); BEST Arabidopsis thaliana protein match is: Bestrophin-like protein (TAIR:AT2G45870.1); Has 1448 Blast hits to 1447 proteins in 512 species: Archae - 0; Bacteria - 1140; Metazoa - 0; Fungi - 113; Plants - 120; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Link
InterPro Scan - TAIR