GT5575

CSHL Arabidopsis genetrap mutant lines

Original: GT5575

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
  • early arrest (before cotyledon emergence) seedlings
  • tiny or dead plants
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)
seedling (PO:0008037)
  • lethal (sensu genetics) (PATO:0000718)

Original: GT5575

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22693944 [Map]; Strand: c
      • AT3G61320.1 - [+] show detail - Bestrophin-like protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT5575 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTATGTGTC AACCACCATT 
    TCTCTTCTTC ATCTCCGTCG ATGACAAACC CTAAACCTAA AACCCCTTAT 
    TTTCCCGCCA ATGTATCAAT CCATGAATCT ATCAGTTTCT TCCAATTTCA 
    CTCACCGATC ACTCCTCGAA TCTAGATTTC CTATATTCTC CAGCGGATTC 
    CGCAAATCCG TCAATCTCAA ACCTCCCCGT GTCTCATCTG GTCCTGAATC 
    CAAAGATTCG GGTCAAGAAA GCTTAACCGA TAAGCTTATC CATCTCCTCA 
    GAGCTGTTCC AGATGGGGCA GACGAGATAA AAGAGCGTGG GATGCAGCAG 
    AAACGCTCTC TCTACACACG CGAGAAATGG GTTGAACATA GAAGCTCTCT 
    TCGGCATGTG TGTCATCTAC TC

AT3G61320.1

Model type
Protein coding
Short Description
Bestrophin-like protein
Computational Description
Bestrophin-like protein; CONTAINS InterPro DOMAIN/s: Bestrophin-like (InterPro:IPR021134); BEST Arabidopsis thaliana protein match is: Bestrophin-like protein (TAIR:AT2G45870.1); Has 1448 Blast hits to 1447 proteins in 512 species: Archae - 0; Bacteria - 1140; Metazoa - 0; Fungi - 113; Plants - 120; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Link
InterPro Scan - TAIR