GT5698

CSHL Arabidopsis genetrap mutant lines

Original: GT5698

Phenotypes

Morphological phenotypes

Original description

  • small or tiny plants
  • small, green vitreous seedlings
Anatomical entity
/structure development stage
Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
  • decreased height (PATO:0000569)
seedling (PO:0008037)
  • green (PATO:0000320)

Original: GT5698

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 9602132 [Map]; Strand: c
      • AT4G17080.1 - [+] show detail - Histone H3 K4-specific methyltransferase SET7/9 family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT5698 - 3-prime edge
    TCCCTGAGTT TCAGATTCTT CCTTCTCTTT GTCTTCTCGA TTATCGCTTT 
    TTCTTTCGTC CTTTCGATCT CTCTCAAATT CGCTCTTCCT CACTTACCAT
    CGATTCGTTT GATTATCGCT CGGTTACTTT CTCTCAAGCT TACCCCTACC
    AGATCATCCT CTTCTTCTCT CTC
  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 9602096 [Map]; Strand: c
      • AT4G17080.1 - [+] show detail - Histone H3 K4-specific methyltransferase SET7/9 family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT5698 - 3-prime edge
    GGNNNGGAGG TTNCGCGACG GCCACCGACC GTTTTCATCC CTAGTNTCAG 
    ATTCNTCCTN CTCTTTGTCG TCTCGATTAT CGCTTNTTCT TTCGTCCTNT
    CGATCTNTCT CANATTCGCT CTTCCTCACT AAAACATCGA TTCGTTTGAT
    TATCGCTCGG TTACTTTCTC TCAAGCTTAC CCCTAACAGA TCATCCNCTT
    CTTCTCNCTC GATNACTTTT CTCNGTCTCT CGGTTTNCNT CTCACNCGAN
    GAGNN

AT4G17080.1

Model type
Protein coding
Short Description
Histone H3 K4-specific methyltransferase SET7/9 family protein
Computational Description
Histone H3 K4-specific methyltransferase SET7/9 family protein; CONTAINS InterPro DOMAIN/s: MORN motif (InterPro:IPR003409); BEST Arabidopsis thaliana protein match is: Histone H3 K4-specific methyltransferase SET7/9 family protein (TAIR:AT2G35170.1); Has 26543 Blast hits to 6479 proteins in 565 species: Archae - 0; Bacteria - 4119; Metazoa - 3892; Fungi - 164; Plants - 2567; Viruses - 0; Other Eukaryotes - 15801 (source: NCBI BLink).
Link
InterPro Scan - TAIR