GT5716

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

embryo lethal

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: GT5716

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 5; Position: 21221167 [Map]; Strand: c
- AT5G52260.1 - [+] show detail - myb domain protein 19
  Distance: 0; Region: exon3 (CDS)

GTTTTCATCA CTCATGCTCC GTTCAGATTT TTTGCAGCCT GATCATGCAT 
ATGCAAATTA TTATTCTTCT GGAGATTTCT TCATCAACAG TGACCAAAAT 
TATGTCTAAG AAGAGTGAAT ATGATCGTAA GAGGAACATA AGCTAGTTAC 
TTGTGTTACA AGTTACAAAA AAAATCTAGA TTCTTAAATC AAACATGAAC 
AAAGAAAAAA CTTATTATGT GGAAAGTCCA TTTGAATTGG TTTTAATCAT 
TTATTTTTCA CGACAATCTG TATATACAGA TAGAATAACA TTTGTAAATT 
TTTTTTATAT GAAAACAATT ATTTGTAAGT TCAGTGTTGT TTATAATTGG 
TTC

5 prime edge [+] show sequence

Chromosome: 5; Position: 21221020 [Map]; Strand: c
- AT5G52260.1 - [+] show detail - myb domain protein 19
  Distance: 0; Region: exon3 (CDS)

CATCATCACT TCCTCTTCAT TGCTTTGATC TTGAGTTTCA TTAATGTGCT 
TGGAATCTGT AAAAGCAGAG GAGTAATCGA TGTGTGGATT TGAAGAACTG 
ATCCACTCGG AGAAGAACAG TTTAGGCAAG TTATTACTGT TGTTCATGAT 
CATGTTGTTG TTGTTGCTTT CTTTGGATGG TGATGAAGTT GGATTCTCTG 
AAAATTTCTG GAAGGAGATC ACGTGATCTA GGGTTTCGGT TTCCAGATTC 
CTTTTCCCGC AAGAAAGTAG TGAAGAAGGA GATTCTGTGA GGTCTGATAT 
TTGGCTTTTG AGTTGTGGTT GAGATTTGAG CCATCTCTTC TTCAGATAGG 
AATGCCAATA GTTCTTAATC TCGTTGTCTG TTCTTCCCGG TAAATATTTT 
GCAATCCGAG ACCACCTAAT CAGACCCAAA TCATAAAATC AAATGAAAAA 
TCTACTTAAT GAATGGTTTT TCACTAAGAC CTGAATGGAT GGATTGTAGA 
CTACAAATAT AGAAGGTTTA TTTTTTATTA GGGTTTTTCT TACTTGTTAC 
CCAAGGAAGA ATGTAAAGTC AAG

AT5G52260.1

Model type: Protein coding
Short Description: myb domain protein 19
Curator Summary: Member of the R2R3 factor gene family.
Computational Description: myb domain protein 19 (MYB19); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 18 (TAIR:AT4G25560.1); Has 8937 Blast hits to 8289 proteins in 544 species: Archae - 0; Bacteria - 0; Metazoa - 775; Fungi - 488; Plants - 5833; Viruses - 3; Other Eukaryotes - 1838 (source: NCBI BLink).
Link: InterPro Scan - TAIR