GT5801

CSHL Arabidopsis genetrap mutant lines

Original: GT5801

Phenotypes

Morphological phenotypes

Original description

  • tiny plants
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT5801

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17435953 [Map]; Strand: w
      • AT2G41790.1 - [+] show detail - Insulinase (Peptidase family M16) family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT5801 - 5-prime edge 
    TGAAGAAAAG ATCAAACTTT ACGAATCAGT AAGCGATAAT CCAAAATCAA 
    AGGAATCAAT ATCAGAAACC AAATCGTAGC GATCTCAAAC CTTATCGGTA 
    TCGGGATCGC TGATCAACAG GACCTGGAGC AAGTTCTTAA GGACAATCAT 
    CCGATATTCT CTGTTATCCG TACGTGGCTT CAGTATTTCA ACACCTCCCA 
    CCGTCGTGTT CGATTTCTCG ACGGCCATCT TTGTTCGATT ACGTTTCGTC 
    TTCGGTGGGT CTTCTTACCT CTTCATCTCT CTCG

AT2G41790.1

Model type
Protein coding
Short Description
Insulinase (Peptidase family M16) family protein
Computational Description
Insulinase (Peptidase family M16) family protein; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) family protein (TAIR:AT3G57470.2); Has 9660 Blast hits to 9541 proteins in 2186 species: Archae - 9; Bacteria - 6247; Metazoa - 831; Fungi - 633; Plants - 271; Viruses - 3; Other Eukaryotes - 1666 (source: NCBI BLink).
Link
InterPro Scan - TAIR