GT6054

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

embryo lethal

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: GT6054

Determination of insertion point(s)

3 prime edge [+] show sequence

Not mapped
Flanking Genome Sequence: GT6054 - 3-prime edge
```
TGCCTCCTAC CCTGGAGAAC ATCACCCAAA AACAGAGCCA AACAAAAAAA 
AAA
```
3 prime edge [+] show sequence

Not mapped
Flanking Genome Sequence: GT6054 - 3-prime edge
```
TGCCTCCTAC CCTGGAGAAC ATCACCCAAA AACAGAGCCA AACAAAAAAA 
AAA
```

5 prime edge [+] show sequence

Chromosome: 3; Position: 5458997 [Map]; Strand: c
- AT3G16100.1 - [+] show detail - RAB GTPase homolog G3C
  Distance: -175; Region: promoter

GTTATCAGTA ATCTTATACA GTTGCAAGCA TCATCTTCAT TAATACAACA 
AGAATATTCT CTGGCTTATG TAATTAAGAT TTATTATATT AAAAAATTGG 
AACATTCAAG ATTTATATTA ATATAGAGAA TCTCACGTTA AAATGCAAAC 
CAACAATTAC TTTAAAGTAA GAAAAAAAAC TGTTTGTGTT TCAGTCTCAA 
GCTTCTAATT TCTATGACAC TGAATAA

AT3G16100.1

Model type: Protein coding
Short Description: RAB GTPase homolog G3C
Computational Description: RAB GTPase homolog G3C (RABG3c); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3D (TAIR:AT1G52280.1); Has 25544 Blast hits to 25522 proteins in 774 species: Archae - 27; Bacteria - 219; Metazoa - 13379; Fungi - 3488; Plants - 2822; Viruses - 20; Other Eukaryotes - 5589 (source: NCBI BLink).
Link: InterPro Scan - TAIR