GT6082

CSHL Arabidopsis genetrap mutant lines

Original: GT6082

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT6082

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 19504463 [Map]; Strand: w
      • AT3G52580.1 - [+] show detail - Ribosomal protein S11 family protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: GT6082 - 3-prime edge 
    TANGATNTTA ATAGGTTAAA GTTTTCATCG CTAGGTGGTG GTCTTGTTAA 
    GNACCAGTGG CANGGAGTTT CACNNGTNTG GCAGTGATTC CGAGTNCCTG 
    TGTTGGGAAA TGNTATTCAC CAAATCGATT AAGTATAGAA ACATAAAAGA 
    TTATCAAGTT GTCTGCTTGG TAATGCAATT TCTTTGCCTT TACCTTGCAT 
    CGCTGAGCAA CATCTTGTGC CGCAAGCATA GCAGCATAAG GTGAGGACTC 
    ATCTCTGTCG GCTTTCACCT TCATTCCACC TACAGAAGTN GGAAATCGAA 
    ACAGCAATTT TAGCAACCCA TTGTTATTTA AGAACAATGC AATTTCCAAA 
    CANATAAACA AAAGGAATTC CTCNAAAGTT AAACGAACAA AGACTAAAGA 
    CGCTTCAGCT CACACCCTAT AGAGAAGACC ATAATACTAA TANCAATGGT 
    AACTAACTTA GTTCTATAAG CAGGAACACT GATGCCGTCA AGAACAAAGC 
    AATTTCTATA AAGATATCAA CGAATTCCTC GAAAAAACTT NAAAGANCAG 
    ATACTAAGCA NAACCTTTAG GCNTCAAGAA C

AT3G52580.1

Model type
Protein coding
Short Description
Ribosomal protein S11 family protein
Computational Description
Ribosomal protein S11 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11 (InterPro:IPR001971), Ribosomal S11, conserved site (InterPro:IPR018102); BEST Arabidopsis thaliana protein match is: Ribosomal protein S11 family protein (TAIR:AT3G11510.1); Has 8774 Blast hits to 8774 proteins in 2899 species: Archae - 250; Bacteria - 4863; Metazoa - 589; Fungi - 162; Plants - 729; Viruses - 0; Other Eukaryotes - 2181 (source: NCBI BLink).
Link
InterPro Scan - TAIR