GT6238

CSHL Arabidopsis genetrap mutant lines

Original: GT6238

Phenotypes

Morphological phenotypes

Original description

  • tiny plants
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT6238

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 13783352 [Map]; Strand: w
      • AT2G32460.1 - [+] show detail - myb domain protein 101
        Distance: 0; Region: exon2 (CDS)
      • AT2G32460.2 - [+] show detail - myb domain protein 101
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT6238 - 3-prime edge 
    GTATTCCCAC GTTGGGGGCN CGNTTTCAAC CGNGCGNTAC CGAGGGCCTT 
    CATCCNTAGT GTAATCNCAA CCACATCCTT GAGTNCATCT CCGACAATGC 
    GGACACAAGA AATACCAATA AGAAAGACAT TGATGCTATG AGTTATAGTT 
    CATNGCTTAT GGGAGATCTT GAGATAAGAT CGAGTTCTTT CCCTTTAGGA 
    CTAGACAATA GCGTCCTAGA GCTTCCTTCA TCTCNCTCNA CGA

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT6238 - 5-prime edge 
    AACACGTGAG GATCAGGACG CACCCTTTTT GATGGTTGAG

AT2G32460.1

Model type
Protein coding
Short Description
myb domain protein 101
Curator Summary
Member of the R2R3 factor gene family.
Computational Description
myb domain protein 101 (MYB101); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 33 (TAIR:AT5G06100.3); Has 9097 Blast hits to 8389 proteins in 483 species: Archae - 0; Bacteria - 10; Metazoa - 807; Fungi - 477; Plants - 5908; Viruses - 7; Other Eukaryotes - 1888 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G32460.2

Model type
Protein coding
Short Description
myb domain protein 101
Curator Summary
Member of the R2R3 factor gene family.
Computational Description
myb domain protein 101 (MYB101); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 33 (TAIR:AT5G06100.3); Has 8826 Blast hits to 8366 proteins in 480 species: Archae - 0; Bacteria - 10; Metazoa - 663; Fungi - 452; Plants - 5861; Viruses - 5; Other Eukaryotes - 1835 (source: NCBI BLink).
Link
InterPro Scan - TAIR