GT6287

CSHL Arabidopsis genetrap mutant lines

Original: GT6287

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT6287

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2484653 [Map]; Strand: w
      • AT5G07790.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon3 (CDS)
      • AT5G07790.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT6287 - 5-prime edge 
    GATAACAAGT TGAGAAGTTT GAAAAGAAGA AGGTCTTGGA TCTTGAATTA 
    CCGGTTTTTG AGTATAGTGA TATGCTTGAA GAAGTCCATG AAGCTCAAAA 
    CTTTTTGGAA GAGCAATCTC TGCAAAGGAT GTCTCTGGAT TCGGGTAAGC 
    AGTCGAGTAA GCTACAACTT GATTTGAATG AACCTGCCAA GATTGAGGAA 
    CATTCAGATT ATGTGTTCAA TCAGTTTCTA AGTTCAGTTA TATCAAATGA 
    AATTGGAGAA GAGTCTGATA CAAAGAATGA GGGAGAAAGT TTAGTAAAAG 
    GTTCCAATGG GATAAATGAA GCGCAAGGAT CTGTAAAATG

AT5G07790.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G61300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G07790.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G61300.1).
Link
InterPro Scan - TAIR