GT6304

CSHL Arabidopsis genetrap mutant lines

Original: GT6304

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT6304

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21402718 [Map]; Strand: w
      • AT3G57780.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (T...
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: GT6304 - 3-prime edge 
    TCTTCATCCA GATTCTCAGT CACTCGTAAA TTTTCATTTT TTTTCTCCCT 
    TTTTAAATAT CTTCCCTCTA TTTTCCA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21402721 [Map]; Strand: w
      • AT3G57780.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (T...
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: GT6304 - 3-prime edge 
    GTTTCTTCAT CCAAATTCTC AGTCACTCGT AAATTTTCAT TTTTTTTTTC 
    CCTTTTTAAA TATCTTCCCC CTATTTTCCA AATATAAAAA ATCAAAATTC 
    TTCCTTTTAA ATGCCCTAAT ATCAAAAACC AACTTTGGGA ATTTGTAAAA 
    ATCTTACTAA TTGCTTATTT GGGGACTTGC CGTTTTTATT ATTAAAAATT 
    TAAACCATTT TTTTCCCTTT C

AT3G57780.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 3163 Blast hits to 2460 proteins in 357 species: Archae - 16; Bacteria - 291; Metazoa - 841; Fungi - 335; Plants - 248; Viruses - 72; Other Eukaryotes - 1360 (source: NCBI BLink).
Link
InterPro Scan - TAIR