GT6394

CSHL Arabidopsis genetrap mutant lines

Original: GT6394

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT6394

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 819464 [Map]; Strand: w
      • AT3G03450.1 - [+] show detail - RGA-like 2
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: GT6394 - 3-prime edge
    AAGANGGANN CCCGATCGTT ACCGACCGTT TNCATCCCTA CTAGNTCCNT 
    ATCNCCCTAN TANTTGAGTA CATATAATGC GCGATCNTNT ANCANTTGCC
    TTATNCNTCT CTNTCGANNA AAATGGAAGG ATAACGATTC TGTATGTTTT
    TTACTTGATC CAATATATAT GAATTTATTT AAATGATTTT GTGTCATATA
    TTTTTCAAAT TTGGACAGTT TCGTNGATAA CATGGGAAGT GAACGTGAGC
    GTTTCTGAAA AGGCGGATCC AAAATGTACT TTCAGTTTCG AGGACTGATG
    TCAGCCTTTG TTAAAAGATT TTCTTCGAAA TATATTTTGG TACATTTTTG
    TTTTCGAAAC AGATTGTTCN TCTCTCTCGA CGA

AT3G03450.1

Model type
Protein coding
Short Description
RGA-like 2
Curator Summary
Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.
Computational Description
RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR