GT6408

CSHL Arabidopsis genetrap mutant lines

Original: GT6408

Phenotypes

Morphological phenotypes

Original description

  • dead or very tiny and chlorotic plants
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT6408

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 6164984 [Map]; Strand: c
      • AT2G14475.1 - [+] show detail - pseudogene, similar to putative beta proteasome subunit, blastp match of 64% ...
        Distance: -21; Region: promoter
    Flanking Genome Sequence: GT6408 - 3-prime edge 
    GTGTGGGTCC TTAATCCTNA TAGGNCCTTN TNNCCCTTTC AANCGCNGCG 
    GNCCNTGGGN CCCCCCTACT AAATGANTCT CATNCGCTGG TCATGATTAA 
    CATCAGGTCC AGGCTTAGAG CATGTGTCAG GTACAAAAGC TTCATAAATT 
    GAATTAGCAG ACGCATTTCC TCCAGTTTCA ATCATGGAAT CGACTTCCTC 
    ATCTGACCAT TCATCAAGTG TCACAGACAA AACCTGGAGA AACCAAACTA 
    TGAGTACACA ATGAAACCAA AATGTAATAA AGCAAAGAAG ATATGTCACC 
    TTTAAAATAT GAGTGCCGAG GCTTCTGTNC ACACCGCAAC TTTTAAGCAA 
    ATGAATACTC TGATATTTGC TGATCTGAAA ACAAGCTACT AACTGATTAT 
    TCAATATAAG AACAAACACA AAGATACATA ACTAAAGACA CAAGAACATG 
    TAGATGAAGC TCTAATCGCA TAATGCGAAT AAGTAACTTT CAGTTATGGT 
    AAANAAATGT GAGATTTTCA ACAACTCTAT CAGAGTTTTG ACGTTGTANA 
    TTAACCCCTA AATGAACAGA GAACATACNG AACCAAAGAC ATTGTATTAT 
    CATAAGATTA GCTATACTAA ATGACATGTT GTTTATCAGC AAAACTACCA 
    TAAGATAAGA AAAAAAGAGG CTTAGAAGCG ATGACTTACG CCCATTTAGG 
    AACAGAAGCG CCACNATCAG CGCAGACTCG GTTATCAGGT TGATTAAAAG 
    ATCTCTGATT CTCCTTTTTA CCTGTTACAC ACACAATGTG GATTGAGTCC 
    CAACATAATC NGAACCATTG TGACCCCCTG AAAAACCTAA AAAAANTCTA 
    GAAAATTCCT CTNAATTCTA TAAAAATTCN TT

AT2G14475.1

Model type
Pseudogene
Computational Description
pseudogene, similar to putative beta proteasome subunit, blastp match of 64% identity and 2.7e-16 P-value to GP|14594921|emb|CAC43321.1||AJ291736 putative beta proteasome subunit {Nicotiana tabacum}
Link
InterPro Scan - TAIR