GT6432

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

tiny plants

Anatomical entity /structure development stage	Phenotypes
whole plant (PO:0000003)	decreased height (PATO:0000569)

Original: GT6432

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 2967739 [Map]; Strand: w
- AT1G09190.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: -21; Region: promoter

AATNGATGAG TTTCATCCCT ACGCAAAACA ACTATAATTG AGCGAGAGTG 
GTAGAGNGGN GCAGNGGNGG TTTAATGGAA ATCGAGCGTA AGCTGCTGCG 
TCTTCTCCAC GGCCACAATA CTCGAACCCG TTTACCCGAA ATCCACGCCC 
ATCTTCTGCG TCACTTCCTT CATGGTTCCA ATCTCCTTCT CGCCCACTTC 
ATCTCACTCG ACNA

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 2967744 [Map]; Strand: w
  - AT1G09190.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
    Distance: -26; Region: promoter
Flanking Genome Sequence: GT6432 - 3-prime edge
```
ANGANNANCG ACCGTTTTCA TCCCTACGCA AAACAACTAT AATTGAGCGA 
GAGTGGTAGA GAGGAGCAGA GGAGGTTTAA TGGAAATCGA GCGTAAGCTG 
CTGCGTCTTC TCCACGGCCA CAATACTCGA ACCCGTTTAC CCGAAATCCA 
CGCCCATCTT CTGCGTCACT TCCTTCATGG TTCCAATCTC CTTCTCGCCC 
ACT
```

AT1G09190.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: shoot apex, embryo, sperm cell, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 21 (TAIR:AT2G20540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR