GT6435

CSHL Arabidopsis genetrap mutant lines

Original: GT6435

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT6435

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 822643 [Map]; Strand: c
      • AT3G03456.1 - [+] show detail - unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 173...
        Distance: -101; Region: promoter
    Flanking Genome Sequence: GT6435 - 3-prime edge 
    AATNNNANCN CGACNGGNNT NAACNACCAG TNCNATCTCG TNCNCGGTAN 
    TATGCNCNTT NTCGTGNNCN TCCCGNANGT TCACTATAAN AANAAGTAGT 
    GGGGATGTTT NTTAAGTNAG GTCACCNTCC CNGATNCNAN AANATGACAT 
    NCGTNGTTGT GTTANAANTC ACATGGTGCA TGCTTTTCCA TTTTTAGTCA 
    TTTGATGTAA CTTGTGTCTA AATTGGCCTG TTTTGCTTTN GTGGTTTACA 
    TTATTTGTTA CTTTTTATTT AGGATCCCTC TTTTAAAATT CATAAGATGA 
    GAGAATCGAA ACTGAAGCGC GTCATGCTCA CTCGCCAAAA CTAGTCCACC 
    TCAAAGAACA CTTCATCATC GTCAATTTAT CTTTCACCTT ATTCACTACC 
    TTTCAAGGTT TAACTACATC ACCAAACTAC GAGTATTTGG ATAACCAAAC 
    CAAAAAAAAA TCTGANTCAT GGTTTCATTT ACCGAATATT CAAATCAAAA 
    TCCCCACTTC TTCGCCACTT CTCATGTTCA CCATTTTCAT TTTCTTCATC 
    ATTCAANAAA TCTTCTAATG GTTCCTTCTC TTCCTTCTGG CTATTATTGT 
    TGTTGTTATT GTTCCCCCAT CCATTCATCA NCAACATCAT CTCATTAGGG 
    TTCATCTCNC NCC

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT6435 - 5-prime edge 
    AAACTCTACC GTTTTCATTT TCATATTTAA CTTGCGGGAC GGAAACGAAA 
    ACGGGA

AT3G03456.1

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR